Candidatus Puniceispirillum marinum: SAR116_0556
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Entry
SAR116_0556 CDS
T01207
Name
(GenBank) putative fatty acid oxidation complex alpha subunit
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb00071
Fatty acid degradation
apb00280
Valine, leucine and isoleucine degradation
apb00310
Lysine degradation
apb00362
Benzoate degradation
apb00380
Tryptophan metabolism
apb00410
beta-Alanine metabolism
apb00640
Propanoate metabolism
apb00650
Butanoate metabolism
apb00907
Pinene, camphor and geraniol degradation
apb00930
Caprolactam degradation
apb01100
Metabolic pathways
apb01110
Biosynthesis of secondary metabolites
apb01120
Microbial metabolism in diverse environments
apb01200
Carbon metabolism
apb01212
Fatty acid metabolism
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
SAR116_0556
00650 Butanoate metabolism
SAR116_0556
09103 Lipid metabolism
00071 Fatty acid degradation
SAR116_0556
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
SAR116_0556
00310 Lysine degradation
SAR116_0556
00380 Tryptophan metabolism
SAR116_0556
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
SAR116_0556
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
SAR116_0556
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
SAR116_0556
00930 Caprolactam degradation
SAR116_0556
Enzymes [BR:
apb01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
SAR116_0556
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
SAR116_0556
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
SAR116_0556
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
UDPG_MGDP_dh_N
NAD_binding_2
AlaDh_PNT_C
Pyr_redox_2
Motif
Other DBs
NCBI-ProteinID:
ADE38799
UniProt:
D5BRA2
LinkDB
All DBs
Position
complement(586234..588177)
Genome browser
AA seq
647 aa
AA seq
DB search
MHVTNIKYDHWHVERDDDGIVWLGLDVADKSVNVLTTAVLRELADISKGLSDAPPTGLVL
HSHKNRGFIFGADINEFEAFSSEDVVKAHIAKTLETIQRIDDLPCPTVALIDGVALGGGY
ELALGFDVIVGVDDPSVQIGFPEVNLGLLPGYGGTGRIFKRVGLATALDMVLYGKPLKAK
DAKSCNAIDLLVNNNNELKAEAIKIIKAYKGRELPDPLIVDSTDLIAVETAKIEARFTEN
NTPAPFEILRHFAMENPDQARLITAESHIFARLMMGGASRGLRRVFALNDAVKKQGRGNS
DVTHIHVIGAGVMGGDIAAVAAMSGFKVTLQDINVEAIESAVKRAHGLYDRRLRSPDMAA
AAKNRLHVDHTGTGLHDADLLIEAVAENLDLKQKVFADAETKMKAGAIMATNTSAIPIED
IGAALKKPERLIGMHFFNPVPVLPLVEIVHTQASDADAIHRAMCVSGAMKKLPIACKSSP
GFMVNRALLPYLFAAIDAVIDGENADMIDQALVEFGMPMGPIELADQIGLDVCHDAGIVL
GMSETSQSRLQTLINAGTIGRKSGQGFYQWDDKKAIRPRASYDADALQAIALRLLTPLVA
ECRAAVTEGVVTSRDMADAAMLFGVGFAAHTGGPLFWADDNPALAIV
NT seq
1944 nt
NT seq
+upstream
nt +downstream
nt
atgcacgtaacaaatattaaatatgaccattggcatgtcgaacgcgacgatgatggcatt
gtctggcttggccttgatgtggcggacaaatcggtcaatgtacttaccacagctgttttg
cgcgaattggcagacatatcaaaaggtctatctgatgccccgccaacagggctggtgctt
cattcgcataaaaaccgcggttttatttttggtgctgatatcaatgaatttgaagcattc
tcaagcgaagatgtggtgaaagcccatattgccaaaacccttgaaacgatccagcgcata
gacgatttgccatgcccgacggtggcattgattgatggtgttgcccttggtggcggttat
gaattagcccttgggtttgatgtcattgttggcgttgatgatccatctgtgcaaattggc
tttccggaggtcaatcttgggcttttacctggttatggtggtacgggccgtatattcaaa
agggtaggccttgcgacagctttggatatggtgctttatggtaaaccgctaaaggccaag
gatgcaaaatcatgcaatgcaattgatttattggtaaataataacaatgaattaaaagcc
gaagctattaaaataattaaagcctataaaggtcgtgaattgccagatcctctaattgtg
gattcaacggatctgattgctgtagaaaccgctaaaattgaagcgcgttttaccgaaaac
aacacgccagccccatttgagattttacgtcatttcgccatggaaaacccggatcaggct
cggttgattacggcggaaagccatatttttgcccgcttgatgatggggggtgcctcacga
ggtttacggcgtgtttttgccttgaatgatgcagtaaaaaaacaaggccgtggcaacagt
gatgtcacccatattcatgtcatcggtgcaggtgtcatgggcggtgatattgcggcggta
gcggcaatgagtgggtttaaggttacgcttcaggatatcaatgttgaggccattgagtcg
gctgtaaaacgtgctcatggcctgtatgatcgccgtttgaggtcaccggatatggcggcg
gcggcaaaaaaccgtttgcatgttgatcatacaggcaccgggcttcatgacgccgatctg
ttgattgaggcggtagcggaaaaccttgatcttaaacaaaaggtctttgccgacgccgaa
accaaaatgaaagctggcgcgatcatggcgacaaacacttcggcgattcctattgaagat
attggtgctgcgctgaaaaaacctgagcgtctaattggcatgcatttcttcaatccggtg
ccggttttgccattggttgaaattgtccatacccaggccagtgatgctgacgcgattcat
cgtgccatgtgtgtatcaggggctatgaaaaaattaccaattgcctgtaaatcatctccg
ggtttcatggtgaaccgggcattgcttccctatttgtttgccgctatcgatgccgtgatt
gatggtgaaaacgccgatatgatcgatcaggcgctagttgaatttggcatgcctatgggg
cccattgaattggcggatcagattgggcttgatgtatgtcatgatgccggcattgtcctc
ggcatgtcggaaacgtcccaatcacgactgcaaacgttgattaacgctggaaccattggc
cgcaagagtgggcagggcttttatcaatgggatgataaaaaagctatacggccacgagca
tcttatgatgcagatgcgttacaggcaattgcgttacggttgctgacgcctcttgtggct
gaatgccgggcggcggttacagaaggtgttgttacatctagggatatggcagatgccgcc
atgctttttggtgtgggttttgctgcccatactggcgggccattgttctgggcggatgac
aatccagcgttggctatagtttga
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