Candidatus Puniceispirillum marinum: SAR116_0603
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Entry
SAR116_0603 CDS
T01207
Name
(GenBank) extracellular solute-binding protein family 5
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAR116_0603
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
apb02000
]
SAR116_0603
Transporters [BR:
apb02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
SAR116_0603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
ADE38846
UniProt:
D5BRE9
LinkDB
All DBs
Position
complement(640388..641974)
Genome browser
AA seq
528 aa
AA seq
DB search
MKTLLRSCALAASLLLSSVSAHAAKDGGTLAFLVQPEPPTLASYVSTSGPIGLVMPKVYE
GLFDYDNDGKMIPILAESYDMSADGKTVTFNLRKGVTWHDGKPFTSADVKFTIMEVLKKV
HPRGPNSFREVSSIETPDAHTAIFNLDNPAPYMMRSFSAYESPMVPMHLLEGQDVKSAPL
ANNPVGTGPFKFVEWKKGQYIRLDKNENYWQEGLPHLDRIVGRFIPDASTRTAAMENGEV
LYAAYNAIPNIDAVRLKERDDIDVTTDGYSMINPMALIEFNTKEGAFVDPAVRRAISTAI
DRRFMIDTIFFGYGKPATSALSSNFKATNLHAEMPNYPERGDVAAANAILDKAGFKKDGN
GVRMTAVLDLIPYGEDWRRAGEYMKQAMGDIGIQLELRYEDVPTWLKRVYHRYDFAMNIN
YFYQLPDPVLGVHRHYGTNQIRQGTHFVNSSRYSNPTLDALLDSGSKEPDAAKRTATYKE
IQTILANDMPVVNLFELEFLTVYNTKLKGAYGSAMGAYGSFREAYLDD
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacactattaagaagctgtgcactcgctgcatcgctgttgttgagttcagtgtct
gcgcatgccgcaaaagacggtggaacacttgcgtttttggttcagcctgagccaccaaca
ttggcgtcttacgtatcaacatcagggcctatcggtttggttatgccaaaagtgtatgag
ggtctgtttgattacgataatgacggcaagatgattcctattcttgctgaaagctatgat
atgagtgcagacggtaagaccgttacattcaatcttcgcaagggcgttacatggcatgat
ggtaaaccatttacctctgctgacgtcaaattcactattatggaagtgttgaagaaggta
caccctcgtggccctaactctttcagagaagtgagcagtatcgagacaccggatgcgcat
acagctatcttcaatcttgataaccctgcaccatatatgatgagatcattctctgcctat
gaatcaccgatggtgccaatgcatcttcttgaaggccaggatgttaaatctgctccattg
gcaaataaccctgttggcacaggtccattcaagtttgtcgagtggaaaaaaggccagtat
atccgcctagataagaatgaaaactattggcaagaaggtttgcctcaccttgaccgtatt
gttggtcgttttatccctgatgcgtcaacacgtacagcggcaatggaaaatggcgaagtt
ttgtatgcggcttataacgccattcctaatatcgatgcagttcgtttgaaagagcgcgat
gacattgatgtcacaactgatggctattcaatgatcaatcctatggctttgatcgaattc
aacaccaaagaaggtgcttttgttgatcctgccgttcgtcgtgcgatttctacagcaatc
gatcgtcgtttcatgattgatacgatcttctttggttatggtaagccagcgacaagtgcg
ctcagcagtaacttcaaggcaacaaacctgcatgctgaaatgccaaactatccagaaaga
ggcgacgttgcagcggctaacgctattctcgacaaagccggcttcaagaaagatggcaat
ggcgttcgcatgaccgcggttctggatcttatcccttatggtgaggactggagacgcgct
ggtgagtatatgaagcaggcaatgggtgacattggcatccagctggaacttcgttacgaa
gacgtgccaacatggttgaagcgtgtttatcaccgttatgactttgcaatgaacattaac
tatttctaccagttgccagatccggttctgggtgttcatcgccactatggtactaaccag
atccgtcagggtacacattttgtgaactcatcacggtatagcaacccaacgttggacgca
ttgcttgactcaggttcgaaagagccagatgccgccaagcgtacagctacatataaggaa
attcagacaattctggccaacgacatgcctgtcgttaacctgtttgagttggaattcctt
actgtttacaacaccaaactaaaaggtgcatatggctcggcaatgggtgcatatggttcg
ttcagagaagcatatttggacgactaa
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