Candidatus Puniceispirillum marinum: SAR116_0649
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Entry
SAR116_0649 CDS
T01207
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
apb
Candidatus Puniceispirillum marinum
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apb03400
]
SAR116_0649
DNA repair and recombination proteins [BR:
apb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
SAR116_0649
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_25
ATPase
Zn_ribbon_LapB
ChlI
RecA
DnaB_C
nSTAND3
AAA_16
NTPase_1
NACHT
AAA_22
AAA_24
MeaB
AAA_14
Lon_C
SLFN-g3_helicase
AAA_30
AAA_29
AAA
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ADE38892
UniProt:
D5BRJ5
LinkDB
All DBs
Position
687514..688884
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AA seq
456 aa
AA seq
DB search
MARSSVSFVCQQCGATSPKWSGRCDDCGAWNTLAEERNEAPSGPGKRSQGRRISLEALDL
PPDTKPLPRHLSHISEFDRVSGGGLVPGSATLIGGDPGIGKSTLLLQLVCKLASGGLKAA
YISGEESADQVRMRARRLGLSDTNVQLATATNASDIAASLGGVDGPDVIVIDSIQTMYLP
TLDSAPGTVSQVRATAQELIRSAKQQGAALLIVGHVTKDGAIAGPRVLEHMVDSVLYFEG
DRSHHFRILRSVKNRFGATDEIGVFEMVETGLAEVPNPSELFLADRRDEVTGAVVFAGIE
GSRPLLVEIEALVAPSSLASPRRNVVGWDSSRLAMLTAVLEARCGVPLSGRDIFLNVAGG
MKISETAADLAVAAALISSVTGRPAPKRTVFFGEVALSAELRQVAQAESRLKEAAKLGFD
NAIMPRPRKKLSTSSKISVAQPSTLSDLIDIMGGMT
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcacgatcatcggtcagctttgtgtgccagcaatgcggcgcgacatcaccaaaatgg
tcaggccgttgcgacgattgtggagcttggaatacgcttgccgaagaacgcaatgaagcc
ccttcagggccaggcaaacgtagtcagggtcgtcgcatatcgcttgaagcactggatctt
ccgcccgacactaaaccattaccgcgacatctatcacatatttcagaatttgatcgtgta
tccggaggtgggctcgtgcctggctcggcaaccttgattggcggtgatcccggtattggc
aaatcaaccttgttattgcaacttgtttgcaagctggcatctggtggattgaaagcagcc
tatatttcgggagaagaatcagccgatcaggtgcgcatgcgcgcacggcgtcttgggcta
agcgataccaatgtgcaattagccaccgccaccaatgccagtgatatcgccgcgtcactt
ggtggtgttgatggccccgatgttattgtcatagactcgatacagactatgtatctgccc
acattagactcggcgccaggaacggtctcgcaggtacgtgcgacagcacaggaactcatt
cggtctgcaaaacagcaaggtgctgccttgttgattgttgggcatgtgaccaaggacgga
gccatcgctggcccccgtgtgcttgaacatatggtggattcagtactgtattttgaaggt
gatcgctcgcatcatttccgcattctgcgcagtgttaaaaaccggtttggtgctacggat
gaaattggcgtcttcgaaatggttgaaaccgggcttgccgaagtgcccaacccatccgaa
ctatttctggctgaccgccgtgacgaggtcactggcgcggttgtttttgccggcatcgag
ggaagccgtccacttctggttgaaatagaagcgcttgttgccccttcatctctggcctca
cccagacggaacgtggtgggatgggacagtagccgccttgccatgctaacagcagttctc
gaagcccgatgcggtgttcccttgtcaggccgggatatttttctgaatgtagctggtggt
atgaaaatatccgaaacagccgcagatttggcggtggccgcagctttgatctcgtcagta
accggacgacctgcgcctaaacgcactgtgttttttggcgaagtcgctttatcagccgaa
ttacgtcaggtggcgcaggccgaatcacggttgaaagaagcggcaaagctgggttttgat
aatgcaatcatgccacgaccgcgtaaaaaactatccacatcgtcaaaaatatctgttgct
cagccatctacattatctgacctgattgacattatggggggaatgacatga
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