Candidatus Puniceispirillum marinum: SAR116_0689
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Entry
SAR116_0689 CDS
T01207
Name
(GenBank) HhH-GPD
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAR116_0689
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apb03400
]
SAR116_0689
Enzymes [BR:
apb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SAR116_0689
DNA repair and recombination proteins [BR:
apb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAR116_0689
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HHH_5
AF1548-like_C
Motif
Other DBs
NCBI-ProteinID:
ADE38932
UniProt:
D5BRN5
LinkDB
All DBs
Position
730933..731592
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AA seq
219 aa
AA seq
DB search
MTNDLLIDMKTILLASGGAIDQLSAIDADVADVIKQYGPPPDRSLPANFDTLARAIVGQQ
ISRAAATSIWNRMEANGVSEVDVIATKSPDDLAELGLSRRKAEYIIGIADEIVSKRIDLH
ELATLDGQAVQDRLVQIRGIGAWTADNFRLFALGDMDAWPVNDIALQEGMKRLKKLSHRP
KAPEMETLGEAWRPYRGAGALVLWHLYGIVVRKATISDI
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgacaaatgacttgttaattgacatgaaaaccatactgcttgcgtctggcggcgccatt
gatcagctgagcgcgattgacgcagatgttgctgatgtcataaagcagtatggaccacca
cctgatagatcgcttcctgccaatttcgataccttggcgcgcgcgatcgtcggacaacag
atttcgcgcgcagctgccacatcaatctggaatagaatggaagcaaatggcgttagcgaa
gtagatgtcattgcaacaaaatcacctgatgatcttgccgaacttggcttgtcgcgccgc
aaagccgaatatatcatcggtatcgctgacgaaatcgtatccaaacgaattgatctgcat
gaattggccactttggatggacaggcagtgcaagaccggcttgtgcaaattcgcggcata
ggcgcctggacagcagataatttccgcctttttgctttgggcgatatggatgcttggcct
gttaacgatattgcgcttcaagaagggatgaagcggctgaagaaactgtcacatcgacca
aaggcacctgagatggaaaccttgggcgaggcctggcggccttatcgcggggctggtgcg
cttgtgctttggcacctttacgggatagtggtacgcaaagccacgatcagcgatatctaa
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