Candidatus Puniceispirillum marinum: SAR116_0796
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Entry
SAR116_0796 CDS
T01207
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
apb
Candidatus Puniceispirillum marinum
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apb03400
]
SAR116_0796
Enzymes [BR:
apb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SAR116_0796
DNA repair and recombination proteins [BR:
apb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SAR116_0796
Prokaryotic type
SAR116_0796
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ADE39039
UniProt:
D5BRZ2
LinkDB
All DBs
Position
complement(846957..848504)
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AA seq
515 aa
AA seq
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MHVVWFKKDLRVWDHAPLVAASAAGAVLPIYVVEPALWAQPDMSYRHYAFLGETLASLDE
SLTKLGQPLVIYAGDMPSVLAGIHQKYGITALYSHEETGNGWTYARDLAVQEWCKDHHCP
WHEFAQYGVHRPLRSRRGWAGKWDKMMQADVVPAPDHLSSVGIKGVPLPSASALGLVDDE
CNERQKGGRNEAIALLKSFLASRGQKYRYEMSSPVTAADSCSRLSAHLAFGAVSLREVFQ
ASRRRQMAIRDSGTGNKRAWQNALKSFESRLHWHCHFMQKLEDEPAIEFRPFHSAYESLD
KTHADAASRLTAWVEGRTGYPLVDAVMRSLTATGWLTFRMRAMTMSFASYHLWLDWRSPA
RHLARSFIDYEPGIHYSQCQMQSGITGINTIRIYNPIKQSQDQDPQGIFIRRWVPELRHI
SDNLIHTPWIRPDQAPDYPAPIVDEKIARKSASQQMHDIRKSSMHRREAARIVTKHASRK
EGVPLSRRIQSGTDDMHIKRRQKQLDQDSQLELGL
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
atgcatgttgtttggtttaaaaaggatttgcgtgtatgggatcatgcgccactggttgcg
gcctctgctgctggtgctgtcttgcctatttatgttgtcgagcctgcattatgggcgcag
cctgacatgtcatatcgtcattatgcgtttcttggtgaaacccttgccagccttgatgaa
agcctaaccaaattaggtcagcccctggttatatatgcgggtgatatgccaagcgtgcta
gctggcatccatcaaaaatatggtataacggcgctttattcgcatgaagaaacggggaat
ggctggacatatgcccgtgatctggctgttcaagaatggtgtaaggaccatcattgtccg
tggcatgaatttgcgcagtatggtgtgcatcgcccgcttcgttcacggcggggctgggct
ggcaaatgggacaagatgatgcaggccgatgtagtgcctgcgccagatcatttatcatca
gttgggataaagggggtaccattgcccagtgctagtgccttgggtcttgttgatgatgaa
tgcaatgagcggcagaaaggtggccgaaacgaggcgattgcgctgttaaaaagctttctg
gcaagccgtgggcaaaaataccgttatgaaatgtcatcacctgtgaccgccgctgatagc
tgttcgcgtctatcggcacatctggcctttggtgctgtgtcactgcgcgaggtatttcaa
gcctcaagacgccggcaaatggcaatacgcgacagtggcaccggcaataagcgagcatgg
cagaatgccctaaaaagctttgaaagccgactgcattggcattgccatttcatgcagaaa
cttgaagatgaacctgccattgaatttaggccttttcattcggcttatgaatctctcgac
aagacgcatgccgatgccgcttcccgacttaccgcatgggtagaggggcgcaccggctat
ccccttgtcgatgcagttatgcggtcactgacagcgactggctggctgacctttcgaatg
cgtgccatgaccatgagctttgccagctatcatctatggctggattggcgatctccagcc
cggcatcttgcgcgtagttttatcgactatgaaccaggcattcattacagccaatgccag
atgcagtcgggcattaccggcattaatacgatccgtatctataatccgatcaagcaaagt
caggatcaggatccacaaggcatttttatccggcgctgggtacctgagctgcggcatata
tcggataatttgatccatacgccatggatacggccagatcaggcaccggactatcctgcg
cccatcgtcgatgagaaaatcgcccgtaaaagcgctagccagcaaatgcacgacatacgc
aaatcatccatgcaccgccgtgaagcggcgcgtattgtgaccaaacatgcgagtcggaaa
gagggggtgccactgtcccgcaggatacaatcaggcactgacgatatgcacatcaaacgc
cgccaaaagcagctggatcaggatagccagctggagcttgggctatag
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