Candidatus Puniceispirillum marinum: SAR116_1021
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Entry
SAR116_1021 CDS
T01207
Name
(GenBank) tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase
KO
K00566
tRNA-uridine 2-sulfurtransferase [EC:
2.8.1.13
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
SAR116_1021
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apb03016
]
SAR116_1021
Enzymes [BR:
apb01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.13 tRNA-uridine 2-sulfurtransferase
SAR116_1021
Transfer RNA biogenesis [BR:
apb03016
]
Prokaryotic type
tRNA modification factors
Thiolation factors
SAR116_1021
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_Me_trans
tRNA_Me_trans_M
tRNA_Me_trans_C
QueC
Arginosuc_synth
Asn_synthase
NAD_synthase
ThiI
DUF7411
ATP_bind_3
Motif
Other DBs
NCBI-ProteinID:
ADE39264
UniProt:
D5BSL7
LinkDB
All DBs
Position
complement(1077064..1078323)
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AA seq
419 aa
AA seq
DB search
MSVAKTASNNVHAATTSASVQATDRPTADLSAINSLGFAKAPADTRVVVAMSGGVDSSVT
AAMLHDEGYEVIGITLQLYDHGVAVQTKGACCAGIDIHDARTVSARLGIPHYVLDYESKF
RDQVMEDFADSYLRGETPIPCVRCNQTVKFTDLLTTAQELGADCLATGHYVQRLETPAGP
VLRRGIDASKDQSYFLFATTAEQMDYLRFPLGGLTKDETRDLARKYGLAVSEKPDSQDIC
FVPNGRYGDVVRRLRPGAVEAGDIVHLDGTVLGQHKGVIDYTIGQRRGLGIGGRKDADEA
DGPLYVVGIDAAAHRVIVGPQSALACYEVHLSETSWVAGGGAPVAGHPVLARLRNTAPAM
PAVLEAGEGGCAIVRLDDPQFGIAVGQAAAIYDAADPENLLGGGWISAAPLAGADGQLS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggccaaaacagccagcaacaatgtgcatgccgcgaccacatctgcgtcggtg
caggctactgataggccgactgctgatctatcagccataaactcgcttggctttgccaaa
gcgcctgccgatacacgggttgtcgtggcaatgtcaggcggcgttgattcatcggtcacg
gcggcgatgctgcatgatgaaggctatgaagtcattggtatcaccttgcagttgtatgac
catggtgtggcggttcagaccaagggtgcctgttgtgcgggcattgatatccacgatgca
cggacagtttcggcgcggctgggcattccgcattatgtgctggattatgagtctaagttc
cgtgatcaggtgatggaagatttcgccgatagttatttgcgcggcgaaacgcctatcccc
tgcgtgcgctgtaaccagacagtcaaatttaccgatttgctgacaactgcgcaggaactt
ggtgcggattgtctggccactggccattatgtccagcgtcttgaaacgccagccggacca
gtattacggcgcggtattgatgcgtccaaggatcaatcctatttcctgtttgcgaccacg
gcagagcagatggactatctgcgctttccgctgggcgggctgaccaaggatgaaacgcgc
gatctggcgcgcaaatatggtttggcggtatccgaaaaacctgacagccaggatatctgc
tttgtgccaaatggccggtatggcgatgttgtgcggcgcttgcggccaggtgctgttgag
gctggtgatattgtgcatcttgatggtaccgttctgggtcagcataagggcgtgatcgat
tataccattggccagcgtcgcggacttggcattggcgggcgcaaggatgctgacgaagct
gacggcccgttatatgttgtcggtattgatgcggccgcgcatcgtgtcattgttggcccg
caaagcgcacttgcctgttatgaggtgcatctgagcgagaccagctgggttgctggtggc
ggtgcgcctgttgccggacatcctgtgcttgcacggttgcgcaataccgccccggcgatg
cctgccgtgctcgaggcaggtgagggtggctgtgcaattgtgcggctggacgatccgcaa
tttggcattgccgtggggcaagcggcggcaatctatgatgcggctgatcctgaaaatctg
cttggtggggggtggatttcggccgccccgcttgcgggtgcagatggtcagctatcctag
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