KEGG   Candidatus Puniceispirillum marinum: SAR116_1045
Entry
SAR116_1045       CDS       T01207                                 
Name
(GenBank) ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent
  KO
K00525  ribonucleoside-diphosphate reductase alpha chain [EC:1.17.4.1]
Organism
apb  Candidatus Puniceispirillum marinum
Pathway
apb00230  Purine metabolism
apb00240  Pyrimidine metabolism
apb01100  Metabolic pathways
apb01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:apb00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    SAR116_1045
   00240 Pyrimidine metabolism
    SAR116_1045
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:apb03400]
    SAR116_1045
Enzymes [BR:apb01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     SAR116_1045
DNA repair and recombination proteins [BR:apb03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    SAR116_1045
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_2_N TACO1_YebC_N GrpE Ribonuc_red_lgN
Other DBs
NCBI-ProteinID: ADE39288
UniProt: D5BSP1
LinkDB
Position
1104849..1108496
AA seq 1215 aa
MHFERRFTQDGTNPYDKLAFRFATSEIRNPDGTIVFRAENVEIPEQFSQVATDILAQKYF
RKAGVPAALKRVEESAVPSWLWRSIPDEAALAKLPEDERFTGETSAKQVYDRLAGTWTYW
GWKGDYFSTEEDAKVYFDEMRFMLANQMAAPNSPQWFNTGMHWAYGIDGPSQGHYYVDFK
TGKLTRSASAYEHPQPHACFIQSVSDDLVNEGGIMDLWVREARLFKYGSGTGSNFSRLRG
SGENLSGGGKSSGLMSFLRIGDRAAGAIKSGGTTRRAAKMVTVDIDHPDIEEYVDWKVVE
EQKVAALVAGSKLAQKHMGEVMAACQITDGLDDDERFDPKVNKVLRKAIISARKSMIPEN
YVQRVIQFAQQGYNEIEFKTYDTDWDSDAYLTVAGQNSNNSVRVSNDYLQAVLDGGDWNL
IKRRDDGVAKTIKAKDLWEKIAHAAWACADPGLQYDTTINEWHTCPEGGRINASNPCSEY
MFLDDTACNLASLNLMQFRKQDGTFDIEMFEHGCRFWTLTLEISVLMAQFPSKEIAQLSY
EYRTLGLGFANIGGLLMAQGHSYDSDEGRAICGAISAIMTGTSYATSAEIAGEVGPFPQY
KKNAKHMLRVMKNHRLAAHSKASGYKGLSILPVPLDAKSCPDQDLVNAAKAAWDKAVDLG
TKNGYRNAQSTVIAPTGTIGLVMDCDTTGIEPDFAIVKFKKLAGGGYFKIINRVVPEALD
KLGYGKDQVKDIINYAVGAGSLKNCQSISVNALKDKGFGDAELAKVEAAMESAFDVKFVF
NRFTLGDEFCKDKLGFSDEQLNDFEFNMLEALGFDKDAVEAANIHVCGSMTLEGAPHLKD
EHLPIFDCANVCGRIGKRFLSVDSHITMMAASQPFISGAISKTINMPNAATVEECGAAYM
LSWRLGLKANALYRDGSKLSQPLSSGLVEDIEDDDEAMAALETPVAAAAPQVIEKIVERI
VRAERDRLPDRRKGYTQKASVGGHKVYLRTGEYEDGRIGEVFIDMHKEGAAFRSLMNNFA
IAVSIGLQYGVPLEEFVEAFTFTRFEPQGIVTGNDAIKMSTSILDYTFRELAISYLDRHD
LGHVNRDDLDVTTTGSGENQSELMNKVTSRGFIRKQGLVVYSNEGTAALAEPVANTASET
ASIATMRTAEAPVARADAGTVASADTAPNIAIERVQQARIQGYEGEACPECQNFTLVRNG
TCLKCNTCGGTTGCS
NT seq 3648 nt   +upstreamnt  +downstreamnt
atgcattttgaaagacgattcacccaggacggaaccaatccttacgacaaactagctttc
aggttcgccaccagtgaaattcgtaatccagacggcacaattgtgtttcgggctgagaac
gtagaaattccagagcaattttcacaagttgccaccgatatccttgcgcagaaatatttc
cgcaaggccggcgtgcctgcggctttgaagcgcgttgaagaaagcgctgtaccatcatgg
ctttggcgttcgattcctgatgaagcggctttggcgaaactgcctgaagatgagcgcttt
accggcgaaacatccgccaagcaggtttatgaccggcttgcgggcacctggacctattgg
ggctggaaaggtgactatttttctaccgaagaggatgccaaggtttattttgatgaaatg
cgcttcatgctggccaaccagatggccgcgccaaattcgccgcaatggttcaacacgggc
atgcattgggcttatggtatcgatggcccaagccagggacattattatgtcgatttcaaa
accggcaagctaacccgttcggcaagcgcttatgagcatccgcagccgcatgcctgtttc
atccagtctgtcagcgacgatctggtcaatgaaggcggcatcatggatctgtgggtacgt
gaagcccgcctgttcaaatatggttcgggcaccggatcaaacttcagccgcttgcgcggt
tcgggtgaaaacctatccggcggtggtaaatcatctggcttgatgagctttttgcgcatt
ggtgaccgggctgccggtgccatcaagtctggcggcacaacccgccgcgccgcaaaaatg
gtgactgtcgatatcgaccatcctgatatcgaagaatatgtcgattggaaagttgtcgaa
gaacaaaaggttgccgcgcttgttgcgggatcgaaactggcgcaaaagcatatgggcgaa
gtcatggctgcctgtcagatcactgacgggttggatgacgatgagcgctttgatcccaag
gtcaataaggtgctgcgcaaagctattatttctgcgcgtaaatccatgatccctgaaaat
tatgttcagcgcgtgattcaatttgcccagcaaggctataacgaaattgaattcaaaacc
tatgataccgactgggactcagacgcctatctgaccgttgctggccagaattcaaacaat
tcggtgcgcgtcagcaatgactatcttcaggcggtgcttgacggcggcgactggaatttg
atcaaacgccgcgatgatggcgttgccaaaaccatcaaagccaaggatctttgggaaaag
attgcgcatgccgcatgggcctgtgctgatccgggtctgcaatatgacaccaccatcaat
gagtggcatacctgccctgaaggggggcggatcaacgcgtctaatccatgttcggaatat
atgttccttgatgatactgcctgtaatctggcgtcattgaacctaatgcagttccgcaaa
caagacggcacattcgatatcgagatgtttgaacatggctgtcgtttctggacgctaacg
ctggaaatttcggttttgatggcgcagttcccctcaaaggaaattgcccagctatcatat
gagtatcgcacattgggtctgggttttgccaatatcggtggcttgctgatggcacaaggc
cattcatatgacagtgatgaaggccgtgcgatctgtggtgctatttcggcgatcatgacc
ggcacatcctatgccacatcagctgaaatcgctggtgaagtaggtcccttcccgcaatat
aagaaaaacgccaaacatatgttgcgggtgatgaagaaccatcgtctggccgcgcacagc
aaggcgtcaggctataaaggtctgtcaatcctgcccgtaccacttgacgcaaaatcatgt
ccagatcaggatctggtcaatgcggcaaaggcagcatgggacaaggctgtcgatcttggc
accaagaatggttaccgcaacgcccagtcaaccgtcatcgcgccaacaggcaccatcggt
ctggttatggattgtgacaccaccggaatcgagccagactttgccatcgtaaagttcaaa
aagctggccggcggtggttacttcaagatcatcaaccgggttgttcccgaagccttggat
aagcttggctatggtaaggatcaggtcaaagacattatcaattatgccgttggtgcggga
tcattgaaaaactgtcagtcgatttcggtcaatgcgcttaaagacaaaggctttggtgat
gccgaactggcaaaagtcgaagccgctatggaaagcgcctttgatgtgaaattcgtcttc
aaccgcttcacccttggtgacgaattctgcaaggacaagctgggcttttcggatgaacag
ctgaatgatttcgaattcaacatgctcgaagcgcttggctttgacaaagacgcggtcgaa
gcggccaacatacatgtttgtggatcaatgacactcgaaggtgcaccgcatctaaaagac
gaacatctacctatctttgactgtgccaatgtatgtggacgtatcggcaaacgcttcctg
tcggttgatagccacatcaccatgatggctgcatcccagcccttcatttcgggcgcgatt
tccaagactatcaatatgccgaatgcggcaacagttgaagaatgcggggcggcctatatg
ctgtcatggcgtcttggcctgaaagccaatgcgctataccgtgacggatcaaagctgagc
cagcctttgtcatctggccttgttgaagatatcgaagacgatgatgaggctatggccgcg
ctggaaacaccggtggctgctgccgcgccgcaggtgattgagaaaatcgtcgagcgtatc
gtccgtgccgaacgtgaccgtctgcctgaccgccgtaaaggctatacgcagaaagccagc
gttggtggacataaggtctatctacggacaggtgaatatgaagatggccgcattggcgag
gtctttatcgatatgcataaagaaggtgctgccttccgttcattgatgaataactttgct
atcgctgtatcgattggtctgcaatatggcgttccactcgaagagtttgtcgaagccttt
accttcacccgtttcgagccacaaggcatcgtgactggcaatgatgcgatcaagatgtca
acctcgattcttgattatacattccgcgaactggcaatttcatatcttgaccgccacgat
cttggacatgtcaatcgcgacgatcttgacgtcaccacaactggcagcggtgaaaatcag
tctgagcttatgaacaaggtcaccagccgtggctttatccgtaagcaaggtcttgttgtg
tactcgaatgaaggtaccgccgcccttgccgagcctgtcgccaacacggcatcagaaaca
gccagtatagcgaccatgcgcacagccgaagcgccagttgccagggctgacgcagggact
gtggcaagtgcagatacagcaccgaacattgccattgaacgtgtgcaacaggcacggatt
caaggctatgaaggtgaagcctgtcctgaatgtcagaactttacccttgttcgcaatgga
acctgtctaaaatgtaatacctgtggtggcactacaggatgtagctag

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