Candidatus Puniceispirillum marinum: SAR116_1065
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Entry
SAR116_1065 CDS
T01207
Name
(GenBank) deoxyxylulose-5-phosphate synthase
KO
K01662
1-deoxy-D-xylulose-5-phosphate synthase [EC:
2.2.1.7
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb00730
Thiamine metabolism
apb00900
Terpenoid backbone biosynthesis
apb01100
Metabolic pathways
apb01110
Biosynthesis of secondary metabolites
Module
apb_M00096
C5 isoprenoid biosynthesis, non-mevalonate pathway
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SAR116_1065
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
SAR116_1065
Enzymes [BR:
apb01000
]
2. Transferases
2.2 Transferring aldehyde or ketonic groups
2.2.1 Transketolases and transaldolases
2.2.1.7 1-deoxy-D-xylulose-5-phosphate synthase
SAR116_1065
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DXP_synthase_N
Transket_pyr
Transketolase_C
E1_dh
Transketolase_N
TPP_enzyme_C
PFOR_II
DUF1294
Stealth_CR3
Motif
Other DBs
NCBI-ProteinID:
ADE39308
UniProt:
D5BSR1
LinkDB
All DBs
Position
complement(1139413..1141335)
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AA seq
640 aa
AA seq
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MTDDNKTPLLDKISAIKDLRRIPESDLQRLAAELRHETIRAVAKTGGHLGAGLGVVELTV
ALHYVFNTPDDRLIWDVGHQAYPHKILTGRRDRIETLRQRDGLSGFTKRDESEFDPFGAG
HSSTSISAGLGMAVASDLQSTPRNVIAVIGDGAMSAGMAYEAMNNAGASESRLIVILNDN
DMSISQPVGAMSSYLSRLITSEPFHSIRDLVREVTSKFPAEIERTARRAKDVARDLIGVN
SVFSQLGFMHIGPLDGHDVNQLLPILKNLRDTHTNGPVLLHVVTEKGHGHPFKDQSHEKY
HAVPKFDIITGTQQKSAGNVPNYTSVFANSLIKAAEADSKIVAITAAMPSGTGLDKLKAK
FPSRVFDVGIAEQHAVTFAAGMASEGMKPFCALYSTFLQRGYDQLIHDVCLQNLPVRFAI
DRAGVVGADGATHAGIYDVAYLSCLPNMVIMCPSDEAELIHMVATSVAYDDGPSALRYPR
GEGVGCELPDEAEILPIGKGRMIREGDDIAILSLGTRLTDCLAAADAMAVQGVNVAVADA
RFAKPLDTDLLAHLATNYRKLVIVEENSPGGFSAHVMTYLANHGLLDTGLQVRLMTLPDI
YIEHDSQAGQLALAGIDAAGIERMLTSLSSASASGKASTL
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgaccgatgataataagacacctttgcttgataagatttcggccatcaaggatttacgg
cgtatccctgaatcggatctacaacgtctagctgctgaattacgtcatgaaacgatccgc
gcggttgccaaaacaggggggcatcttggcgcgggccttggtgttgtcgaactgactgtt
gccttgcattatgtgtttaacacgcctgatgatcgcctgatctgggatgtcgggcatcag
gcctatccgcacaagatactgacaggtcggcgggatcgtattgaaaccttgcgccagcgc
gatggtctgtcgggctttaccaagcgcgatgaatctgaatttgatccctttggagctggg
cactcgtcaacgtccatttcggccggtctgggcatggctgttgccagtgatctgcaatca
acaccgcgcaatgtcattgcggttattggcgatggtgcgatgagcgcgggcatggcatat
gaagcgatgaataatgcgggtgcgtccgaaagccgcctgatcgtcattctgaatgataat
gatatgtcgatttcacagccagtgggcgcgatgagcagttatctgtcccgtctgattaca
tctgaacctttccattccattcgtgatcttgtccgcgaagtgaccagcaagtttccagcc
gaaatagagcgtacagcgcgccgtgcaaaagatgttgcccgcgatcttattggcgtcaat
tcggttttcagccagcttgggtttatgcatatcgggccgcttgacgggcatgatgtgaac
cagctgctaccgattttgaaaaatttgcgtgatacccatacaaacggacctgttcttttg
cacgtggttacggaaaaggggcatggacaccctttcaaagatcaatcacatgaaaaatat
catgcggttccaaaatttgacatcatcaccggtacccagcaaaagtcggctggcaatgta
ccaaactatacctcggtttttgctaatagccttattaaggcggccgaagccgatagtaaa
attgtggcgataacagcggcgatgccgtcaggtaccgggcttgataagctcaaggcaaaa
ttccctagtcgtgtttttgatgttggtatcgccgaacaacatgcggtgacctttgccgcc
ggtatggcaagcgaaggcatgaagcctttctgtgcgctctattcgacctttctgcaacgt
ggctatgatcagttgatccatgatgtatgtttgcaaaatctgccggtacgatttgcgatt
gatcgggcaggtgttgttggcgctgatggcgcaacgcatgcaggtatctatgatgtagcc
tatctgtcctgtttgccgaatatggtgatcatgtgtccgtcggatgaggctgaattaata
catatggtggcaacctcggttgcctatgatgatgggccatcagcgttacgctatccacgt
ggtgagggtgtcggctgtgaattgcctgatgaagccgaaattttgccgattggcaaaggg
cggatgattcgtgaaggcgacgatattgctatcctgtcattgggaacgcggctaactgat
tgtctggcggcagctgatgcaatggcggtacaaggggtgaacgttgcggtcgctgatgcc
cgttttgccaagccgcttgatactgatttgctggcgcatctggcaacaaattatcgcaaa
cttgtaatcgtcgaagaaaacagcccgggtggtttttcggcgcatgtgatgacatatctg
gccaatcacggcttgcttgatacagggttgcaggtgcggcttatgaccttgccggatata
tatattgaacatgacagccaggcaggccaactcgcgcttgcgggcatagatgcggcaggt
atcgaacggatgctaacatctctgtccagcgcatcggcctcgggcaaggctagcacgctg
taa
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