Candidatus Puniceispirillum marinum: SAR116_1252
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Entry
SAR116_1252 CDS
T01207
Name
(GenBank) Ribosomal protein S1
KO
K02945
small subunit ribosomal protein S1
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
SAR116_1252
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
apb03011
]
SAR116_1252
Ribosome [BR:
apb03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
SAR116_1252
Bacteria
SAR116_1252
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
OB_RRP5
Motif
Other DBs
NCBI-ProteinID:
ADE39495
UniProt:
D5BT98
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Position
1372479..1374176
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AA seq
565 aa
AA seq
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MAADAATENFADLLAESFGKDTNIEGSVVRGFVVEIEGDAVLIDVGLKSEGRIPLKELVS
PGQEADVKIGDEIEVYVERMEDRNGQAVLSRDKARREEAWSVLEASFEKQERVTGIIFGK
VKGGFTVDLSGATAFLPGSQVDIRPVRDLGPLMGSPQPFQILKIDRRRGNIVVSRRAVLE
ESRAEARTELVSNLQEGQVLQGVVKNITDYGAFVDLGGVDGLLHVTDIAWQRISHPSEAL
QIGETVEVQVIRFNAETQRISLGMKQLLSDPWENVEGKFPIGAKMEGRVTNITDYGAFVE
LEAGVEGLVHVSEMSWTKKNVHPGKIVSTSQQVEVMVLDVDLSKRRISLGLKQCTGNPWE
DLSTAHPAGSEIEGEIRNITEFGLFVGLTEEIDGLVHLSDISWDVTGEAALEGFNKGDMV
KAKVLDIDTDKERISLGIKQLTDDPFAGQADNYRKGEVVTCIVSAVSENGLDVTVGDAMT
GFIRRADLSRERNEQRADRFAVGEKVDAVVTNLDKKSRKLTLSIKARESAEEKQAMADFG
SSDSGASLGDILGAALAKRDTTDDK
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atggcagcagacgctgcaactgaaaactttgccgaccttctagctgaaagttttggcaaa
gacaccaatattgagggctctgtagtccgcggtttcgtagtagaaatcgaaggcgacgcg
gtgcttattgatgttggattgaaatccgaaggccgcatcccactaaaagaacttgttagc
cccggacaggaagccgatgtaaaaattggcgacgaaattgaagtttacgttgagcgtatg
gaagaccgtaatggtcaggccgtgctcagccgtgacaaggcacgccgcgaagaagcctgg
agcgtactcgaagcatcatttgagaagcaagagcgtgttaccggtattatctttggcaag
gtcaaaggcggctttaccgtcgatctttcaggcgcgaccgcctttttgccaggtagtcag
gttgatattcgcccggtgcgcgatcttggcccattgatgggttcaccacagccattccag
attctgaaaattgaccgtcgccgtggcaacatcgttgtatcgcgtcgggcggttctggaa
gagtctcgcgccgaagcccgcaccgaattggtatccaaccttcaagaaggtcaggtgtta
caaggtgtggtcaagaatatcactgattatggtgcgttcgttgatcttggcggcgttgac
ggtctgctgcatgttaccgatatagcatggcagcgtatcagccatccttcggaagccttg
cagattggtgaaaccgttgaagtacaggttatccgctttaatgcagaaacccagcgtatc
tcgcttggtatgaagcagcttctgtctgatccttgggaaaatgtcgaaggcaaattcccg
atcggtgccaagatggaaggccgcgttaccaacatcaccgattatggtgcctttgttgag
cttgaagctggcgtcgaaggtcttgtccatgtctccgaaatgagttggaccaagaagaat
gttcatcctggcaagattgtatcaaccagtcagcaagtcgaagttatggttctggacgtt
gatctgtctaagcgccgtatttcacttggcctcaagcagtgcacaggcaacccgtgggaa
gacctgagtaccgcacatcctgctggttcagagatcgaaggcgagatccgcaacatcacc
gaatttggtctgtttgttggtcttactgaagaaatcgacggccttgtgcatctatctgat
atcagctgggacgttacgggtgaagctgcacttgaaggcttcaacaaaggtgacatggtc
aaagccaaggttctggatattgatactgataaagagcgtatctcgcttggaatcaagcaa
cttacggatgatccatttgctggtcaggctgacaattaccgcaaaggtgaagttgtcaca
tgtatcgtgtcggctgtatccgaaaatggcctcgatgtgacagttggtgatgccatgact
ggctttatccgccgggctgatcttagccgtgagcgtaacgaacagcgtgctgaccgtttt
gccgttggcgagaaggtcgatgctgtcgttaccaatcttgataagaagtcacgcaaactg
acattatcgatcaaagcacgcgaatctgccgaagaaaaacaggcaatggctgactttggt
tcatcagatagcggcgcaagccttggtgatattctgggtgccgcgctggcaaagcgtgat
accacagacgataagtaa
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