Candidatus Puniceispirillum marinum: SAR116_1253
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Entry
SAR116_1253 CDS
T01207
Name
(GenBank) integration host factor, beta subunit
KO
K05788
integration host factor subunit beta
Organism
apb
Candidatus Puniceispirillum marinum
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apb03032
]
SAR116_1253
03036 Chromosome and associated proteins [BR:
apb03036
]
SAR116_1253
03400 DNA repair and recombination proteins [BR:
apb03400
]
SAR116_1253
DNA replication proteins [BR:
apb03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
SAR116_1253
Chromosome and associated proteins [BR:
apb03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
SAR116_1253
DNA repair and recombination proteins [BR:
apb03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
SAR116_1253
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_euk_1
CATASP
HU-CCDC81_bac_1
Motif
Other DBs
NCBI-ProteinID:
ADE39496
UniProt:
D5BT99
LinkDB
All DBs
Position
1374324..1374602
Genome browser
AA seq
92 aa
AA seq
DB search
MTRSELIARMAAKNPALYHRDIERLVGTILDEISGALERGDRVELRGFGAFSVRHRKARI
GRNPRTGTSVQVAEKKVPFFKMGKGMRERLNR
NT seq
279 nt
NT seq
+upstream
nt +downstream
nt
gtgacacggtctgaactaattgcccgtatggcagcaaaaaatcctgccttgtatcacaga
gacattgaacgtttagtcggaacaatcctagatgaaataagtggcgctttggaacgtgga
gatcgcgttgaacttcgtggctttggcgccttttcggttcgtcatcgtaaagcgcggata
ggccgaaacccaagaacaggtacaagcgtacaagtggctgaaaagaaagtaccttttttc
aaaatgggcaagggaatgcgtgagcgtctaaaccgctaa
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integrated database retrieval system
