Candidatus Puniceispirillum marinum: SAR116_1582
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Entry
SAR116_1582 CDS
T01207
Name
(GenBank) NusA antitermination factor
KO
K02600
transcription termination/antitermination protein NusA
Organism
apb
Candidatus Puniceispirillum marinum
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
apb03021
]
SAR116_1582
03009 Ribosome biogenesis [BR:
apb03009
]
SAR116_1582
Transcription machinery [BR:
apb03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
SAR116_1582
Ribosome biogenesis [BR:
apb03009
]
Prokaryotic type
rRNA transcription factors
SAR116_1582
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NusA_N
KH_5
S1
HHH_5
KH_NusA_C
KH_2
KH_1
Prot_ATP_ID_OB_C
Motif
Other DBs
NCBI-ProteinID:
ADE39825
UniProt:
D5BU78
LinkDB
All DBs
Position
complement(1746427..1748022)
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AA seq
531 aa
AA seq
DB search
MDTSSIPGMELIQVADVVAREKSIDREEVMLAMEEAIQKAGRAKYGLERDIRAMIDRKSG
AIRLERWMEVVEEVEDDETQISVDEGAKLTPAVGLGEFSKQSLPPIEFGRIAAQTAKQVI
SQKVRDAERARQFEEYKDRVGEIVVGTIKRAESYSITVDLGRAEAVIRREEMIPRENLRQ
GDRVRAYIIDVREEQRGPQIFLSRACNEFMAKLFTQEVPEIYDGIIEIKGVAREAGSRAK
ISVLSNDPGIDPVGACVGMRGSRVQAVVGELQGEKVEIIPFNDDPAAFVVNALAPAEVAK
VVMDEVAGRMEVVVPDDQLSLAIGRRGQNVRLASQLSGWYIDILTEAEESERRQEEFRTR
STGFIEALNIDDVIAHLLVAEGFVLPEEIAESTIEELANIQGFDEDIATELQNRAVDYVE
RETTRINEALDKLKVADDLRAFEYISLAMLLSLAENNILTLDDLADLDNEELVSLLGEHG
LSDDAEAGDIIMAARAHWFDDEDDQAADASDSDAPDTEAEAGEISADASDS
NT seq
1596 nt
NT seq
+upstream
nt +downstream
nt
atggatacatcatcaattccgggtatggaactcattcaggtcgccgatgtggtggcgcgt
gaaaaatcgatcgatcgcgaagaagtcatgctggccatggaagaagcgattcaaaaagct
ggccgtgcaaaatatggtctggagcgtgatatccgggccatgattgatcgcaaatcaggc
gcgatccggttggaacgctggatggaagttgtcgaagaggtcgaagatgatgagacccag
ataagcgttgacgaaggtgccaaactgacccctgcagtaggtcttggtgaattttcaaag
caatcattgccgccaatcgaatttggccggattgcggcgcagactgccaagcaggtgatt
tcgcaaaaagtgcgtgatgccgagcgtgcgcgtcagtttgaagaatataaagaccgcgtt
ggtgagattgttgttgggacaatcaaacgtgctgaaagctattcgatcactgttgatctg
ggccgtgccgaagcggtgattcgccgtgaagaaatgatcccgcgtgagaatctgcgccaa
ggcgatcgcgtgcgcgcctatattatcgatgtgcgcgaagaacagcggggcccgcaaatc
tttctatcgcgtgcctgtaatgaattcatggccaagctgtttacacaggaagtgcctgaa
atttatgatggcatcatcgaaatcaaaggtgtggctcgtgaagctggtagtcgtgccaaa
atttcggttctgtcgaatgatccgggcattgatccggttggcgcctgtgtgggtatgcgg
ggtagccgagtgcaagcggttgttggcgaattgcagggtgagaaagtggaaattatcccg
ttcaatgatgaccctgctgcctttgtcgtgaatgcgctggcaccagccgaagttgccaag
gtggtgatggatgaggtggctggccggatggaagttgtcgtgcctgatgaccagctcagc
cttgcgattggccgtcgtggacagaatgtacgcctcgcctcgcaattgtcaggctggtat
attgatattctgaccgaggccgaagaatcggaacgtcgccaggaagaattccgcacgcgc
tcgaccggctttatcgaagcgctgaacatcgatgatgtgatcgcgcatctgctggtggcg
gaaggctttgtcctgccggaagaaatcgccgaaagcacaatcgaggagctggctaatatt
cagggctttgacgaagatattgcaaccgaattgcaaaatcgtgcggttgattatgtcgag
cgtgaaacaaccagaatcaatgaagctcttgataagctgaaagtggctgatgatctgcgt
gcctttgaatatatcagtctggctatgctgctgtcgcttgccgagaataatattctcacc
cttgatgatctagctgacctcgataatgaggagctggtcagcctgttaggcgaacacggc
ctgagtgacgacgctgaagcgggcgatatcatcatggctgcacgggcacattggtttgat
gatgaagatgatcaagccgctgatgcaagcgatagtgatgcacccgatacagaggcagaa
gcaggtgagatatctgctgacgcatctgatagctag
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