Candidatus Puniceispirillum marinum: SAR116_1636
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Entry
SAR116_1636 CDS
T01207
Name
(GenBank) DNA polymerase III, epsilon subunit and related 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb03030
DNA replication
apb03430
Mismatch repair
apb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAR116_1636
03430 Mismatch repair
SAR116_1636
03440 Homologous recombination
SAR116_1636
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apb03032
]
SAR116_1636
03400 DNA repair and recombination proteins [BR:
apb03400
]
SAR116_1636
Enzymes [BR:
apb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAR116_1636
DNA replication proteins [BR:
apb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAR116_1636
DNA repair and recombination proteins [BR:
apb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAR116_1636
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
ADE39879
UniProt:
D5BUD2
LinkDB
All DBs
Position
complement(1805482..1806249)
Genome browser
AA seq
255 aa
AA seq
DB search
MREIALDTETTGINPRDGHRIIEIGCLELLHHLPTGNKLHIYINPEREIDEGAVKVHGLT
SAFLADKPLFADIVDEFLAFIGGDQMVIHNASFDMGFLNAELARLDRPVLPMDRAVDTLM
MARKKFPGAQANLDALCRRFEIDNGHRDLHGALIDADLLASVYIELLGGKQPGLGLDNGT
GSGARSRAGPAGSAGSLGSAGWSGSDHGAETANGTGHFAMSETAIRPIRTHAPSPEEQAA
HDAFLDGMENPIWRQ
NT seq
768 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaaatcgctcttgataccgaaaccaccggcataaacccgcgagatggccatcgc
atcattgaaattggctgtcttgagttgctgcatcacctgcctaccggcaacaaattgcat
atttatatcaaccccgaacgcgagattgacgaaggcgcggtcaaggttcacgggctgacc
agtgcatttctggccgataagccgttatttgccgatatcgtcgatgaatttctggcgttt
atcgggggtgatcagatggtgatccataatgcgtcttttgatatggggtttctgaatgcc
gagctagcccggcttgaccggccagttttgccgatggatcgcgcggttgataccttgatg
atggcgcgcaagaaatttcccggggcgcaagccaatctggatgcgctatgccgtcgtttc
gagattgataacgggcatcgtgatctgcatggcgccttgatcgatgctgatctgctggcc
tcggtctatatcgaattgcttggtggcaaacagccaggtcttggtttggataatggcacc
ggatcaggggccaggtcgcgggcaggtccagctgggtctgccgggtctttagggtcagct
ggttggagtggttcggatcatggtgccgaaacagccaacggaaccgggcattttgccatg
tctgagaccgcgatccgcccgatccggacgcatgcgccaagcccagaagaacaggcagcg
catgacgcctttcttgatggtatggagaatccgatctggcggcaatag
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