Candidatus Puniceispirillum marinum: SAR116_1645
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Entry
SAR116_1645 CDS
T01207
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
apb
Candidatus Puniceispirillum marinum
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apb03016
]
SAR116_1645
Transfer RNA biogenesis [BR:
apb03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SAR116_1645
Prokaryotic type
Methyltransferases
SAR116_1645
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
Dynamin_N
FeoB_N
AIG1
ABC_tran
DUF6528
Motif
Other DBs
NCBI-ProteinID:
ADE39888
UniProt:
D5BUE1
LinkDB
All DBs
Position
1812887..1814263
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AA seq
458 aa
AA seq
DB search
MPDRLLNERPAMTGATFNDTIFALATPPGRSAIAIVRISGKKAAYAADAFDVRCPKMGRF
AVRRLKNADGQPIDEVLLLYMQAPRSPTGEDVLEIHCHGSQAVQTMILDRLAQIAGFRPA
LPGEFTRRAFGNDKFDLSGVEGLADLIDAETPAQLHQAWAQLDGALRKPVTAWRETLISL
AGQLEALIDFADEDLPASVEAALRTSTATLISEIAAIMADNKAGEVIRDGVKVALLGSVN
AGKSTALNAISGRDAVITSAEAGTTRDIVAVKMDLGGVPVTFMDTAGLRDGAGAIEAEGI
RRARQAGRDADFGLIILDGSDPKWPDHLAEISDLTGGQHLIVLNKCDLGLVGSVPEGALH
LSLRDHKDVEVLIAAITKAIAPLNQDGQSAIITRARHRDALMGAMQSLERGLTHDFNVNP
ELAAEDFRMAATALGRITGKIDVEDLLGSIFSSFCIGK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgccagataggcttcttaatgaaagacccgcaatgacaggcgctacattcaatgacact
atttttgcgctagcaaccccgccagggcgttcggctatcgccattgtgcggatcagcgga
aaaaaggccgcctatgcggcggatgcttttgatgtgcgctgtcccaaaatggggcggttt
gccgtgcgccgcctcaaaaatgctgatggccagccaattgacgaagtgctgcttctttat
atgcaggcaccgcggtctccgactggcgaggatgtattggaaatccattgccatggaagt
caggcggtgcagacgatgattcttgatagattagcccagatagcggggttccgtccggct
ttaccaggcgagtttacccgccgtgcctttggcaatgataaattcgacctgtcgggtgtc
gagggtctggctgatctgatcgatgcggaaacccctgcccagctgcatcaggcatgggca
caacttgatggggctttgcgcaaaccggttacggcgtggcgcgaaacgctgatcagcttg
gctggccagctcgaagcgctgattgattttgccgatgaggatctgccagcctcggttgaa
gcggccttgcgtacaagtaccgcaacgctgattagcgaaatagctgccattatggcggat
aataaagcaggcgaagtcatccgtgatggcgtaaaggtggccttgcttgggtcggtgaat
gcgggcaagtcaaccgccttgaatgccatttcgggtcgtgatgcggttatcacctcggct
gaggcaggcaccacacgcgatatcgttgcggttaaaatggatctgggtggcgtgcccgtg
acctttatggatacggctggattgcgtgatggtgcgggggctatcgaagccgaaggcatc
cgtcgtgctcgtcaggctggccgtgatgctgattttggcctgattatccttgatggcagt
gatccaaaatggccagatcatctggccgagattagcgatttgacaggcggccagcattta
atcgtcctcaataaatgcgatctggggctggtggggtcggtacccgaaggcgcgttacat
ctcagcttgcgcgatcataaagatgtcgaagtgctgattgcggcgatcacaaaggcgatt
gcgccgcttaatcaggatggtcagagtgcgattatcacgcgggcgcggcatcgcgacgcg
ttgatgggggcgatgcagagtcttgaacgcggcctgacgcatgattttaatgtgaatccg
gaattggcggccgaagatttccggatggcggcgacggccttgggacggataactggcaaa
atcgatgtcgaagatttacttgggtctattttttcatccttttgtattggcaaatag
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