Candidatus Puniceispirillum marinum: SAR116_1651
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Entry
SAR116_1651 CDS
T01207
Name
(GenBank) DNA polymerase III, delta subunit
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb03030
DNA replication
apb03430
Mismatch repair
apb03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SAR116_1651
03430 Mismatch repair
SAR116_1651
03440 Homologous recombination
SAR116_1651
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apb03032
]
SAR116_1651
03400 DNA repair and recombination proteins [BR:
apb03400
]
SAR116_1651
Enzymes [BR:
apb01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SAR116_1651
DNA replication proteins [BR:
apb03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SAR116_1651
DNA repair and recombination proteins [BR:
apb03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SAR116_1651
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r1_1
His_Phos_1
Motif
Other DBs
NCBI-ProteinID:
ADE39894
UniProt:
D5BUE7
LinkDB
All DBs
Position
complement(1819760..1820794)
Genome browser
AA seq
344 aa
AA seq
DB search
MKVQTRQIAGLLNHPPAHMRAFLFHGNDIGLIHERALALASHYSDNLDDVFSVTRLDSRA
IENDVSVIADALSSIAVFADTRLVLVRGRGTELVEACKLALTPRDNTPPLEGAVLIVEAR
ETTTRHAIVKLFETGDICASIGCYADDSGTIRDLVQTSFAALSINIDRPVMDLIVAKLGA
DRASSRREIEKLSLMAGQGGTLTAQDIEDALEDSTVLAIDDVAGAVADGDIPRLQSAITK
AWSEDANPVMVIRGCHNYFRSLLIAAHAVSTGSSRDMAIKSLRPPVHFKLQGRMAAQLNK
WGYQQAMAALDKLQDIELALKSSSPDDRVICMQGLLGLCLRARS
NT seq
1035 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttcagacccggcagattgcaggtcttctcaaccacccccccgcgcatatgcgc
gcctttttgtttcatggtaatgatatcggcctgatccatgaacgcgccctggcacttgcc
agtcattacagtgacaatctcgatgatgtcttttcggtgacccgccttgatagccgcgcc
attgaaaatgatgtcagtgtgattgccgatgcgctttccagcattgccgtttttgccgat
acccgcctggtgcttgttcgtggccgtggcaccgaacttgtcgaggcttgcaaattggcg
ctgacaccgcgcgacaacacccccccgcttgaaggggctgtgcttattgtcgaagcgcgc
gaaacaacaacgcggcatgcgatcgtcaaattgttcgaaacaggtgatatctgtgcctca
atcggatgttatgctgatgatagcggcaccatccgtgatcttgttcaaaccagctttgct
gcattatctatcaatattgatcgcccggtcatggatctgattgttgccaaattgggtgct
gatcgtgccagttcacgtcgtgaaatcgaaaagctgtcactgatggcggggcagggcggc
acccttaccgcgcaagatattgaagatgccctcgaagacagcaccgttctggcaatcgat
gatgtggcgggtgctgttgctgatggggatattccgcgtctgcaaagcgctatcaccaaa
gcctggtcggaagatgccaatccagtcatggtcattcgcggctgtcataattatttccgc
agtttgctgatcgcggcacatgccgtatcaacaggcagttcgcgcgatatggcaataaag
tcactacgcccacctgtgcatttcaaattacaggggcgcatggctgcgcaattaaacaaa
tggggctatcaacaggcgatggccgcccttgataagctacaggatatcgagcttgcgctg
aaatcatccagccccgatgatcgggtgatctgtatgcagggtctattgggtctgtgcctg
cgcgcacgttcctga
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