Candidatus Puniceispirillum marinum: SAR116_1723
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Entry
SAR116_1723 CDS
T01207
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAR116_1723
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
apb02000
]
SAR116_1723
Transporters [BR:
apb02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
SAR116_1723
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_1
SBP_bac_8
SBP_bac_6
DUF5880
Motif
Other DBs
NCBI-ProteinID:
ADE39966
UniProt:
D5BMC3
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All DBs
Position
1899804..1900874
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AA seq
356 aa
AA seq
DB search
MKRIIKSLPKWALAIGIVSSFATPSYAGEFDGVTLKVATWGGSWKANMEKIIVPKFEALG
GKIEFVTGSPAASFAKLVAGRGRAPFDVMEVLDAQVGDFAQVDYLQPINLDLIPNKKNIQ
SFQYNNTYVGSWFTQEVICYDTEKFSELGIPAPKTYADLAHPALQDKVSLPDINSGAGLA
NFGGVVFAAGGDEENIQPGLDLMAKINATKFWKRGGETKTQFETGDIYAAVVHVGWCARA
ARAGSPVMSVHPEIKPGVKGLAKEGWLGIMKSSDNVAAAHWFINEYLTTDFQYEYAINSG
VFPLNQEAIDKMKTDEINVRLMEMDSGNISKMLRIDYNKVDKTAWINGWNKTLTTN
NT seq
1071 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaataataaaatcattgccgaaatgggctttggctatagggatagtttcaagt
ttcgccacgccatcatatgctggtgagtttgatggggtaacacttaaggttgctacttgg
ggtggctcttggaaagcaaacatggaaaaaattattgtcccaaaatttgaggctttgggc
ggtaaaatcgagtttgtaacaggaagccctgccgcaagttttgcaaagctggttgctggt
agggggcgtgcaccatttgacgtcatggaagtgcttgatgcgcaagttggagactttgcc
caggttgattacctgcaacctattaatctagaccttattccaaacaaaaaaaacatacag
tcttttcagtataataatacttatgtaggtagctggttcacgcaagaagtgatctgttat
gatacagaaaagtttagcgagttaggaataccagctccaaaaacctatgctgatcttgcg
catcccgctttacaagacaaggtttcattacctgacattaactctggcgctggtttggct
aattttggtggggttgtgtttgccgctggtggcgatgaagaaaatattcagccaggactt
gatttaatggcaaaaatcaatgctaccaagttttggaaacgtggtggtgagacaaaaaca
cagtttgagactggtgatatttatgcagccgttgtccatgtgggttggtgtgcaagagca
gctcgcgccggatcacctgttatgtctgtacacccagaaatcaagcctggtgttaaaggc
ttggcaaaagaaggctggttgggaatcatgaagtctagcgataacgttgcagcagcccat
tggtttatcaatgaatatttaaccactgattttcagtatgaatatgcaatcaatagtgga
gttttccctcttaaccaagaagcaattgataaaatgaaaactgatgaaattaacgtaagg
ttaatggaaatggactcgggtaatatttctaaaatgcttcgtattgattacaataaagta
gacaagacagcttggataaatggttggaataagacgcttacaaccaactaa
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