Candidatus Puniceispirillum marinum: SAR116_1754
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Entry
SAR116_1754 CDS
T01207
Name
(GenBank) autotransporter-associated beta strand repeat protein
Organism
apb
Candidatus Puniceispirillum marinum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Big_9
Lactonase
Cadherin_3
Cadherin_5
Motif
Other DBs
NCBI-ProteinID:
ADE39997
UniProt:
D5BMF4
LinkDB
All DBs
Position
1934437..1939182
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AA seq
1581 aa
AA seq
DB search
MPFVSTNSARFDTTTNAYQLTIAENSAVGTLIGRIAFEGESGAVGSVYFNKSGADAAKIR
IEPDGSIYVASDEPLNYEAVGGPPVLDVDFSVLFIGSDGSVEQSATSGSRVATTDVDEGP
TLRVEVETDPFDEHVVDRNGITDTTAFASLTGEDEDDDTVTYSLSGDHAGLFHVVDNEVR
LKDVTTFDFETLGPSIDLTVTAASTGAGGGRQTTEQTITITINDVNEPIIWNHAPKTFTL
AENSNASTPVGSVSAQDGDGDPVSYSMSGEHADKFDIDRDTGAITVKTGAVLDYEEFAAT
NGVFTFQVHAAANGPEGRTSDEEQTVTINLTDLNEPTGWNHAPRAFTLAENSVGGTPVGA
VSARDGDGDPVTYSLTNTLAGKEDNEAGKFQINTTTGAITVRDNAVLDYEAQAGAPLSFK
VVAIAEGPDGRTSRAEQEVTVTLSNVNEPISWNHVPRTFTIAENSTGNTPVGAVTARDGD
GDPITYTKSGDDADKFDIDRDTGAITVRDNAVLDYEAQAGTPLSFTVIATASGADGRIST
SEQQVTVHLSNVNEPIIWNHVPKTFTLAENSNASTPVGSVSAQDGDGDPVTYSMSGDHAD
KFDIDRDTGAITVRKGAVLDYEAFAATKGVFTFQVHAAANGPDGRTSNSSQTVTIDLTDL
NEPTGWNHAPKTFTLAENSNASTPVGAVSARDGDGDPVSYSLSGVHADKFDIDRDTGVIT
VKKGAVLDYEGFAATNGVFTFQVHATANGPDGRTSSGEQTVTIDLTNIDEPPTFVDAAGQ
VIMSDTAAVDEGQTGAGLAALATLRAVDPDGDPVLDIYVTSHANLFHKVGDELRLRPTVE
LDYENLPDDAVDGVIPVRVTAVSRKPGQLPKLTHMTVNVEVGDVGPIDSVSIGTAEHPNI
VQVDAAVGDVVGRVAASSPTGDAITYGLTNADSSVSRYFTIGDDGTITMKAGITDPVFLL
RGYVPLTVTASAGGESESRDITIQVNSITGVHTRPFPSLAGRTKTVQLDLPSRDGDGDLL
HFVPTNGMVTTANGGRYSVAADGTLTYTARAGFEGYDNVMVTYGDSRGGTSQIRMEFDVS
LPTVTVVEGQSQTVTWDLLNLAGLADPSGSVRFTTLPTRGTLQVKRGENIVDVTTSMDIS
AADIAGGRLTYRAEANFDDAHWQTAGFTLTHQGDSRSGNVAIAVRDFDITDLQHIDDSQD
SRYELKNARDVKFIDIGDRTFLLATGGKDDGVTVFEFNPATKRLTFTDSISDNTAYTLNS
ASVMVHVEKNGRHFVYVSGNEDDGITRFTLTSDGELEFENTPGAVVRNSQDSRYTMDGGR
SLTLVQFDNADYLIAAGNSDTGYTVFRIADNGDLNFVRAVTAPVTGDNGQSLSLGSLWGG
IAAEAGGQTYFVIGSETNDSLFVYRMASDGDVTLTDTLTDTSSLELDHPRFGDSFSIGGR
TFLTVAAGGDDGFGIYELSAAGRLSVISSIRDSARLELDSAWDSKAFTLDGQTFIVTTGH
NDDGFSIFLVQDDGTPRFLRSVADNNARQLDRTEHVFFTRADDGDLVMAVAGWRDHGISL
FEIDLDDPDAANPLLTPMPEM
NT seq
4746 nt
NT seq
+upstream
nt +downstream
nt
atgccattcgtcagcactaatagcgcgagattcgacaccaccacaaacgcctatcaactg
accatcgccgaaaacagcgccgtcggcactcttatcggcaggatcgcgttcgaaggtgaa
agcggtgctgtcggcagcgtctatttcaacaagtccggcgctgacgcggcgaaaatccgt
attgagcccgacggctctatctatgtcgcctcggacgaacccctgaattatgaagccgtt
ggcgggccaccggtactggatgttgatttttccgtgctgtttatcggttcggacggctct
gttgaacagagtgccacctccgggtcccgcgtagcgacaaccgatgtcgatgaagggccg
accttgcgcgtggaagtggagaccgatccgttcgatgaacatgtggtcgacaggaacggc
atcaccgacaccacggcctttgccagcctcaccggagaggatgaggatgacgatacggtg
acctacagcctgtccggcgatcatgccgggttgttccatgtcgtcgataacgaggtgcgg
ctgaaagatgtcacgacatttgatttcgagacgctgggtccctcgatcgacctgaccgtc
actgccgcatcgaccggagccgggggcggcagacagaccaccgaacagaccatcacgatc
accatcaatgatgtgaatgaaccgattatctggaaccacgccccgaaaaccttcaccctt
gccgagaacagcaacgccagcacccctgtcggcagcgtttcggcgcaggatggggatggt
gatccggtcagctacagcatgtcgggcgagcacgccgacaagttcgatatcgaccgcgac
accggcgcgatcacagtcaagacaggcgcggtgctggattatgaggaatttgccgccacc
aacggcgtcttcacctttcaggttcacgccgccgccaatggcccggagggacgcaccagc
gacgaggaacagaccgtcaccatcaatctgacggatctgaatgaacccaccggctggaat
cacgcgccgagggccttcacccttgccgagaacagcgttggcggcacccccgtcggcgct
gtatcggcgcgtgacggtgatggtgatccggtcacctacagcctgacgaataccctggcc
ggaaaggaagacaatgaggccggaaaattccagatcaacaccacaaccggcgcgatcacg
gtcagggacaatgcggtgctggattacgaggcgcaggccggcgcaccgctgagcttcaag
gtcgttgccatcgcggaaggtccggacgggcggaccagccgggcggagcaggaggttaca
gtcaccctgtcgaatgtgaacgagccgatctcctggaaccacgtcccgcggaccttcacc
atcgccgagaacagcaccggcaacacacccgtcggcgcggtgacggcgcgcgacggtgac
ggtgatccgatcacctataccaagtcgggtgacgatgctgacaagttcgatatcgaccgc
gacaccggcgcgatcacggtcagggacaatgcggtgctggattacgaggcacaggctggc
acgccgttgagcttcaccgtcatcgccaccgccagcggggcggacgggcggatcagcacc
tcggagcagcaggtcacggttcacctgtccaacgtgaatgaaccgattatctggaaccac
gtcccgaaaaccttcacccttgccgagaacagcaacgccagcacccctgtcggcagcgtt
tcggcgcaggatggtgacggcgatccggtcacctacagcatgtccggcgatcacgccgac
aagttcgatatcgaccgcgacaccggcgcgatcacggtcaggaaaggcgcggtgctggat
tatgaggcatttgccgccaccaaaggcgtcttcacctttcaggttcacgccgccgccaat
ggccccgatggtcgcaccagcaattcatcacagaccgtcaccatcgatctgacggacctg
aatgaaccgaccggctggaatcacgcgccgaaaaccttcacccttgccgagaacagcaac
gccagcacccctgtcggcgcggtgtcggcgcgcgatggggatggcgatccggtcagctac
agcctgtccggcgtccatgccgacaagttcgatatcgaccgcgacaccggcgtgatcacg
gtcaagaaaggcgcggtgctggattatgagggttttgccgccaccaacggcgtcttcacc
tttcaggttcacgccaccgccaatggcccggacgggcgcaccagcagcggcgaacagacc
gtgaccatcgatctgaccaatatagacgaacccccgacattcgttgatgccgccggacag
gtcataatgtccgacacggccgcggtcgatgaaggccagaccggtgcggggctggccgcg
ctggcgacattgcgcgcagtcgatcccgatggtgatccggtccttgatatctatgtcacc
tcgcatgccaatctgttccacaaggttggcgatgaattgcgcctgcggcccacggttgag
ctggattatgaaaacctgccggatgacgcggtggatggcgtcattccggtgcgggtgacg
gcggtcagccggaagccgggccaactgccgaaactcacccatatgaccgtgaatgtcgaa
gtcggggatgttggaccaatcgacagcgtcagcatcggcaccgccgaacacccgaacatc
gtgcaggtggatgccgcggttggcgacgttgtcggccgggtggcggcgtcatcaccaacc
ggggatgccatcacctatggcctgaccaacgccgatagcagcgtatcgcgatatttcacc
atcggggatgatggcaccatcaccatgaaggccggcattaccgatccggtgtttctgttg
cgcggttacgttccgctgacggtgacggccagcgccggcggcgagagcgagagccgggac
ataaccatccaggtgaacagcatcactggggttcatacgagacctttccccagtctggcc
gggcggacgaagacggttcagctggacctgccgtcacgcgacggcgatggtgacttgctg
cattttgtcccgacaaacggtatggtcacaacggccaatggcggccggtacagcgtcgcc
gccgacggtaccctgacctataccgccagggcggggtttgaggggtacgacaacgttatg
gtgacctatggcgacagccgcggcggtacgtcacaaatccgaatggagttcgatgtcagc
ctgccaaccgtaacggtggttgaggggcagtcgcaaaccgtgacatgggacctgttgaac
cttgccgggctggcagacccgtcgggcagcgtgcgattcaccaccctgccaacacgcggg
acgttgcaggtgaagcgcggtgaaaatatcgtcgacgtgacgacatcgatggatatcagc
gcggccgacatcgccggtgggcggctgacctaccgcgccgaggcgaatttcgacgatgcg
cactggcagaccgccggattcaccctgacgcatcagggcgattcccggtccggcaatgtc
gccatcgcggtgcgggatttcgacatcaccgacctgcagcatatcgatgacagccaggat
tcgcggtatgaactgaaaaatgcgcgtgatgtgaagttcatcgacattggtgaccgcacc
ttcctccttgcaacaggtggtaaagatgacggtgtgacagtgtttgaatttaacccagcg
acaaagcgcctgaccttcaccgacagtatcagtgacaatacagcctacacgctgaattcc
gcctcggtgatggtgcatgtggagaagaatggcaggcatttcgtttatgtttccggcaat
gaagatgacggaatcacccgctttaccctgacatccgatggggagctggagttcgagaac
acgcccggggcagtggtccgtaacagccaggattcccgatacaccatggatggtgggcgg
tcactgacactggtgcagttcgacaatgccgattatctgatcgccgccggaaatagcgat
accggatacacggtgtttcgcatcgctgacaatggcgatctgaatttcgtccgcgccgtc
accgcgccggtaaccggtgataacggacaatctctgtcacttggcagtctgtggggcgga
atcgcggctgaggcaggtgggcagacatattttgtcattggatcagagacgaatgacagt
ctgtttgtctatcgcatggcatcggacggcgacgtgaccctgaccgacacattgaccgac
acatccagccttgaactggaccatccccgctttggcgatagtttttctatcggcggccgg
acctttctgacggttgccgcggggggtgatgacggatttggaatttatgaactttccgcc
gccggcaggctgtctgtcatttcaagcattcgcgacagcgcaaggcttgaactggatagt
gcctgggacagcaaggctttcacccttgacggccagacgttcatcgtaaccaccggacat
aacgatgacggcttttcgatctttctggtacaggatgacggcacgccgcgattcctgcga
tccgtcgccgacaataacgcgcgtcagcttgacagaaccgaacatgtgtttttcacccgc
gccgatgatggtgatctggtgatggccgtagctggttggcgtgatcacggcatctcgctg
ttcgagattgatctggacgatcccgatgcggcgaacccgctattgaccccgatgcccgag
atgtga
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