KEGG   Candidatus Puniceispirillum marinum: SAR116_1816
Entry
SAR116_1816       CDS       T01207                                 
Name
(GenBank) signal recognition particle protein
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
apb  Candidatus Puniceispirillum marinum
Pathway
apb02024  Quorum sensing
apb03060  Protein export
apb03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:apb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    SAR116_1816
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    SAR116_1816
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    SAR116_1816
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:apb02044]
    SAR116_1816
Enzymes [BR:apb01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     SAR116_1816
Secretion system [BR:apb02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   SAR116_1816
  Eukaryotic Sec-SRP protein
   SAR116_1816
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 CbiA Zeta_toxin AAA_16 AAA_33 DnaB_C AAA_30 AAA_17 APS_kinase AAA_19 AAA_18 ArsA_ATPase AAA YqeC Thymidylate_kin nSTAND3 AAA_31 NACHT PIF1 KTI12 AAA_14 AAA_28 ResIII NAT10_TcmA_helicase nSTAND_NTPase5 NPHP3_N
Other DBs
NCBI-ProteinID: ADE40059
UniProt: D5BML6
LinkDB
Position
2016056..2017651
AA seq 531 aa
MLLWRVHVIAGLLGIWFVALERIDKWIWNVMFENLKDKLAGVFDGLAKRGALREGDVDAA
LREVRLALLDADVALPVVKTFIEKVREGAVGVEVLKSVRPDQQVIKLVNDALIDALGGDP
APLMTGTNPPSVILMAGLQGSGKTTTAGKLARRLRERDRKKVMVASLDVTRPAAREQLRL
LGEQAEAGILPELDGESPVQIAKRALQSAKLQAYDVLILDTAGRISVDEALMAELRDVRA
ATNPHEVLLVADAMTGQDAVTTASAFNDAVGVTGIVLTRLDGDARGGAALSMRQITGCPI
KFVGIGEKQDALEEFDPARLAGRILDMGDVVALVEKAAESIEAEEAERLARRMAKGQFDM
NDFLSQIRQLQKMGGLGGIMSMLPGIGKMQKQIAAAGVDDNMIKRQEAIILSMTKKERIS
VGLLNASRRKRIASGSGTSVQDVNRLVKQYQDMARMMKKLGGKGGASAMKALLGGGGPFG
GGGMGGAMGGGNMPDLGALAKGLGGKMPGGLSGGLPGGLPGLGSKPPEDKK
NT seq 1596 nt   +upstreamnt  +downstreamnt
atgcttttatggcgcgttcatgtaatcgctggtctgctgggcatatggtttgtggctttg
gaacggattgataagtggatttggaatgtcatgtttgagaatctgaaggacaaattagct
ggcgtatttgacggtcttgccaagcgcggtgcgcttcgcgaaggcgatgttgatgcggcc
ttgcgcgaagttcgtctggccttgcttgacgccgatgttgccttgcctgttgtcaaaacc
tttatcgaaaaggtgcgtgaaggcgcggttggcgtcgaagttctgaaatcggttcgtcca
gatcaacaggttatcaagctggttaatgatgcgcttattgatgcgcttggtggtgatcca
gctcctttgatgacaggcacaaacccaccgtcagttattctgatggcaggtctgcaaggt
tcgggtaaaaccacgactgccggtaaattggcgcggcgtctgcgtgaacgcgaccgcaaa
aaagtcatggtggcgtcgcttgacgtgacacgtccggccgcgcgtgaacaattacggctt
ctgggtgaacaggccgaagccggtatcctgcccgaacttgatggcgagtcgccagtccag
attgccaagcgcgctttacagtcggcaaaattgcaggcctatgacgtgcttattctggat
acggcaggccgtatcagtgtcgatgaagcgctgatggccgaattgcgcgatgtccgcgcc
gcgaccaatccacatgaagtgttgctggttgccgatgccatgacaggtcaggatgcggta
acaacagcttcggcatttaatgatgcggtaggtgttaccggaattgtgctgacgcgtctt
gatggtgatgcgcgtggtggtgcggcgctatcgatgcggcagattaccggctgtccgatc
aaatttgtcggtattggcgaaaagcaggatgcgctcgaagaatttgatccggcgcgtctg
gctggccgtattcttgacatgggtgatgtggttgcgctggttgaaaaggctgccgaaagc
atcgaggccgaagaagccgaacgtctggcccggcgtatggccaaaggccagttcgacatg
aatgattttcttagccagattcgtcagctccagaaaatgggtggacttggcggtatcatg
agcatgttgccaggtattggtaaaatgcaaaaacagatcgccgctgccggtgtcgatgac
aatatgatcaagcggcaggaagcgattatcctgtcgatgaccaaaaaggaacgtatttcg
gtgggcttgctgaacgcatcacgccggaaacgtatcgcgtccggatctggcacatcagtg
caggatgtaaaccgtctggtaaagcaatatcaggatatggcgcggatgatgaaaaagctt
ggcggcaaaggtggcgcgtctgccatgaaagccctgcttggcggcggtggcccctttggc
ggcggcggcatgggcggtgctatgggaggtggcaacatgcctgacctgggtgcactcgct
aaaggattgggaggtaaaatgcccggtggattatcaggggggttgcctggcggtttgccc
ggactgggtagcaagcctcctgaagataagaaatag

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