Candidatus Puniceispirillum marinum: SAR116_1828
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Entry
SAR116_1828 CDS
T01207
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb00020
Citrate cycle (TCA cycle)
apb00190
Oxidative phosphorylation
apb00650
Butanoate metabolism
apb00720
Other carbon fixation pathways
apb01100
Metabolic pathways
apb01110
Biosynthesis of secondary metabolites
apb01120
Microbial metabolism in diverse environments
apb01200
Carbon metabolism
Module
apb_M00009
Citrate cycle (TCA cycle, Krebs cycle)
apb_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
apb_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
SAR116_1828
00650 Butanoate metabolism
SAR116_1828
09102 Energy metabolism
00190 Oxidative phosphorylation
SAR116_1828
00720 Other carbon fixation pathways
SAR116_1828
Enzymes [BR:
apb01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
SAR116_1828
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
GIDA
Pyr_redox_2
Thi4
DAO
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
ADE40071
UniProt:
D5BMM8
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All DBs
Position
2026240..2028030
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AA seq
596 aa
AA seq
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MPDYEIEDHYYDVVVVGAGGAGLRATLGMATAGLKTACISKVFPTRSHTVAAQGGIGAAL
DNMGEGDNWKYHMYDTVKGSDWLGDQDAIEYMCRNAAPAVIELEHYGVPFSRTEDGNIYQ
RPFGGHTLDYGKNMARRACSAADRTGHAILHTLYQQCLKHQAAFHIEYFVLDLLMNDEGE
CAGVIALCMEDGSLHRFWGQQTVLATGGYGRVYFSCTSAHTCTGDGNAMALRAGLPLQDM
EFVQFHPTGVYGAGVLITEGARGEGGYLTNSEGERFMERFAPNAKDLASRDVVSRAMTIE
INEGRGVGPNKDHIMLHLEHIDPETLNMRLPGIMETAKIFCGVDITKEPIPVLPTVHYNM
GGIPTNYNGEVLAPTADDENHVVPGLMAIGEAACVSVHGANRLGTNSLLDIIVFGRAAAK
RAAETITPGDAPRTAPQSATDKAIARLDKMRHADGDVTAASIRLEMQHAMQRHAAVFRSS
ESLADGVERMDGIAAKMAKIGVKDKSLIWNTDLIEALELDNLIGQALVTIRSADQRQESR
GAHAHEDWPERDDDNWMKHTIMRLDERNKSDLSYRGVVMNTLSNDVAPIPPAPRVY
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atgcctgattatgaaattgaagatcattattacgatgttgttgttgttggtgccggtggt
gccggattgcgcgctacgcttgggatggcaaccgctggcctaaagaccgcctgtatcagt
aaagtgtttccgacgcgctcgcatacagtcgcggcgcaaggtggtatcggtgcggcgctt
gataatatgggcgaaggcgataactggaaatatcacatgtatgatacggtcaaagggtcg
gactggcttggtgatcaggatgcgattgaatatatgtgccgcaatgccgcgcctgcggtg
atcgaattagagcattatggggtaccgttttcacgtaccgaagacggtaatatctatcag
cgtccctttggtggtcatacgcttgattatggaaagaatatggcgcgtcgtgcctgttcg
gcagcagaccgtaccggccatgctattctgcatacactatatcagcaatgtctcaagcat
caggcggcctttcacatcgaatattttgtgcttgatctgctgatgaatgacgaaggcgaa
tgtgcgggcgtgattgctttatgtatggaagatggcagtctgcatcggttctggggtcag
cagacagtgctggcaacaggtggttatggccgcgtttatttctcttgtacgtcagcgcat
acatgcaccggtgatggcaatgcgatggcactgcgcgccggattaccgctacaggatatg
gaatttgtccagtttcacccaaccggtgtttatggtgccggtgtgcttattaccgaaggt
gcacgcggcgaaggtggctatctgaccaattcggaaggcgaacgtttcatggagcgcttt
gcgccgaatgccaaggatctggcaagccgtgatgtggtaagccgggcgatgacgatcgag
atcaatgaagggcgcggtgttggcccgaataaagaccatatcatgctacatcttgagcat
atcgatcctgaaacattgaatatgcgtctgccaggtatcatggaaaccgcgaagattttc
tgcggtgtcgatatcaccaaagagccgataccggttctgccaactgtgcattataatatg
ggtggtattccaaccaattataatggcgaggttctggccccaacagccgatgatgaaaat
cacgtcgtaccaggtttgatggctattggcgaagcagcctgtgtttcagtgcatggcgcc
aatcgtctaggtacaaactcactgcttgatatcattgtgtttggccgtgccgccgcaaag
cgcgctgccgaaaccattacccccggtgatgcgccccgcacggcgccgcaatcggcaact
gacaaagcgattgcccgcctcgacaagatgcggcatgccgatggcgatgtgaccgcggcc
agtatccggctggaaatgcagcatgccatgcaacggcatgcggcggtgtttcgttccagc
gaatcgctggccgacggggttgagcgtatggatggtatcgctgcgaagatggccaagata
ggcgtcaaggacaagtcgctgatctggaacaccgatctgatagaggcgctggaacttgac
aatctcatagggcaggcactcgtgaccatccgttcggccgatcaacggcaggaatcacgc
ggtgcacatgctcatgaagattggccagagcgcgatgacgataactggatgaaacatacg
attatgcgtcttgacgagcgcaataaatcggatctgagctatcgtggtgtcgtgatgaac
actttgagtaatgatgtggcgccaattccccctgcgccgcgcgtatattag
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