Candidatus Puniceispirillum marinum: SAR116_1846
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Entry
SAR116_1846 CDS
T01207
Name
(GenBank) hydrolase, NUDIX family domain protein
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SAR116_1846
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apb03019
]
SAR116_1846
Messenger RNA biogenesis [BR:
apb03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SAR116_1846
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
NUDIX_4
Motif
Other DBs
NCBI-ProteinID:
ADE40089
UniProt:
D5BMP6
LinkDB
All DBs
Position
complement(2048924..2049406)
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AA seq
160 aa
AA seq
DB search
MSQITTAYDDRPYRPCVGIFLLNPHGQVFAGRRIDSRAEAWQMPQGGIDPGETPIAACMR
EMCEEIGTNDAELIKEHSEWLNYDIPLPLANRLWQGKYKGQKQKWMAMRFTGSDADINIA
TAEPEFCEWRWLPAAELIDLAVPFKRGVYERILVEFGDLT
NT seq
483 nt
NT seq
+upstream
nt +downstream
nt
atgagccagatcacaactgcctatgatgaccgtccttatcgcccctgcgtgggtatcttc
ctgcttaacccacatggtcaggtttttgctggacgccgcattgacagccgtgctgaagcc
tggcaaatgccccaaggcggcattgacccgggcgaaacaccgattgccgcctgcatgcgt
gaaatgtgtgaagagatcggtaccaatgacgctgaacttatcaaagaacatagcgaatgg
ctgaattatgatattccgttgccactggcgaaccgcctatggcaaggcaaatataaaggg
cagaaacagaaatggatggcgatgcgctttactggcagtgacgctgatatcaatattgcc
acagccgaacccgaattctgcgaatggcggtggctgcctgcggccgaactgatcgatctg
gctgtccccttcaaacgcggggtatatgaacgcatcttggttgaatttggtgatctgacc
taa
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