Candidatus Puniceispirillum marinum: SAR116_1866
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Entry
SAR116_1866 CDS
T01207
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb00300
Lysine biosynthesis
apb00470
D-Amino acid metabolism
apb01100
Metabolic pathways
apb01110
Biosynthesis of secondary metabolites
apb01120
Microbial metabolism in diverse environments
apb01230
Biosynthesis of amino acids
Module
apb_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
SAR116_1866
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
SAR116_1866
Enzymes [BR:
apb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
SAR116_1866
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Motif
Other DBs
NCBI-ProteinID:
ADE40109
UniProt:
D5BMR6
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All DBs
Position
complement(2065680..2066939)
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AA seq
419 aa
AA seq
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MCAFNRLDSGELAVDGLPLSQIAAAYDSPLYVYSGAGIRDAYRDFAAAIAPVNGKVHFAM
KANSALGVLALLAHEGAGADIVSGGELSRALAAGISASDIVFSGVGKSKAEIEQALAANI
GQINAESPAEVAMISAVAKSMGVVAPVALRVNVDVNAKTHAKISTGQRDTKFGISTDQNE
AADLYRVMAADPHITPSGLAVHIGSQLRDMAPFETAYTALLDLGMALRADGLEVPVLDLG
GGVGVDYDHATPTDFTAYGEMVTRIFNKSDFKFGFEPGRAIVANNGVLLTKVIFIKDGDN
KRFVIVDAAMNDLLRPTLYEAHHSIVPVLPAGSDIGLADIVGPVCETGDYIGRGRMMPAL
ASDDLLAVLSAGAYGAVMASAYNTRPPAGEVLVLDGAIHELRAKRTVESYLAEESIPEF
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgcctttaaccgattagatagtggtgagctagctgttgacggtctgccactttca
cagattgccgccgcttatgatagcccgctttatgtctattcgggtgctggaatacgtgat
gcctatcgtgattttgccgccgccatcgcgccggtaaacggcaaggtacattttgccatg
aaagcaaattcggcgcttggcgtgctggctttgctggcacatgaaggagcaggcgcagat
atcgtttcaggcggcgaactcagccgcgccctggcggcaggcatatcggcatcggatatc
gtcttttcgggggttggcaaaagcaaagctgaaatcgaacaggctctggccgccaatatt
ggccagatcaatgccgagtcgccagctgaagttgccatgatcagcgctgttgccaaatcc
atgggcgttgtggcacctgttgccttgcgcgtcaatgttgatgttaacgccaaaacccac
gccaaaatttcgactgggcaacgtgataccaaatttggcatttcaaccgaccagaacgaa
gccgccgacctatatcgtgtgatggcagcagacccgcatattaccccatcggggctggcg
gttcatatcggctcgcaattacgcgatatggcccctttcgaaacggcctatacagccttg
cttgatctgggtatggcattgcgcgccgatgggctggaagtgccggtgcttgatcttggc
ggcggggttggtgttgactatgatcatgccaccccgacagatttcaccgcctatggagag
atggtaacgcgcattttcaacaaatctgatttcaagttcggctttgagcctgggcgggcg
atcgttgccaataatggcgttttgctgaccaaagttatctttatcaaggacggggataat
aagcgctttgtcattgtcgatgcggcgatgaatgatctgctgcgcccaacgctttatgaa
gcccatcattcaatcgtgccggttttaccagctggatcagatataggtctagccgacatt
gttgggccagtttgcgaaacaggtgattatattggtcgtggccgcatgatgcccgcgctg
gcaagcgatgatctgctggcggtcttgtctgctggcgcctatggcgcggttatggcctcg
gcctataatacacgcccgccagctggcgaggtgctggttcttgatggtgcgatacatgaa
ctgcgtgccaaacgcacggttgaaagctatcttgccgaggaatcaattcctgaattctga
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