Candidatus Puniceispirillum marinum: SAR116_1965
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Entry
SAR116_1965 CDS
T01207
Name
(GenBank) Polysaccharide biosynthesis protein CapD type
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb00541
Biosynthesis of various nucleotide sugars
apb00552
Teichoic acid biosynthesis
apb01100
Metabolic pathways
apb01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
SAR116_1965
00552 Teichoic acid biosynthesis
SAR116_1965
Enzymes [BR:
apb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
SAR116_1965
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
GDP_Man_Dehyd
RmlD_sub_bind
3Beta_HSD
CoA_binding_3
NAD_binding_4
PglD_N
adh_short
NAD_binding_10
CoA_binding
NmrA
KR
Motif
Other DBs
NCBI-ProteinID:
ADE40208
UniProt:
D5BN15
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All DBs
Position
2170150..2172072
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AA seq
640 aa
AA seq
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MENNLRLHILALPRFTKRLVVMLVDALLAVMSVWIAFYLRVGEFLSLFTQSAEHFPPSAV
IGAVCLSIPIFMAMGLYRTVFRYSGGSALIAVGQACAFYSLVYITIFTAIGISGVPRTVG
IIQPLILFILIAGSRVSARLWLGGLYDEQLKQNKVKRSLIYGAGVAGRELAAALAHNVEI
KIVGFLDDDKSLHGRKIRGLNVYDPNTISNISKKKNISEVMLAMPSVGRQRRNKILSKLR
GANLAVRTLPSYSDLAQGRVTVNDIRELSIDDILGRDIVTPDPELMSADITDKVVLITGA
GGSIGGELCKQIIKQKPSKLLLFEQSEFALYSILGSLETALQENISDASCALVPILGSVT
DKGLLETTFKEYQPQTIYHAAAYKHVPLVESNPLVGIQNNVFGTLLCAEAAIDAGVKKFV
LISTDKAVRPTNVMGASKRIAEMILQALAEEQVTTTFAMVRFGNVLDSSGSVVPLFREQI
KAGGPVTVTHKDVTRYFMTISEAAQLVIQAGAMTQTISSKKSAPLYLLDMGSPIKIYDLA
KRMIELSGLSLISDSIADGDIEINFIGLRSGEKLYEELLIGDSVMSTSHPKVKVANEVFL
SWGTLRGHLEQLETSVVNSDLDLLHAILVALVSGYQPKSN
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggaaaataaccttcgacttcatattctggctttgccacgctttaccaagcggcttgtc
gtcatgcttgttgatgcgcttttggctgtcatgtcagtatggatagctttctatttgcgc
gtgggagaatttctgtcgttattcacccaaagtgccgaacattttcctcctagcgctgtt
atcggtgccgtatgtttgtctattccaattttcatggctatggggctatatcgaacagtt
ttccgttattcaggtggatctgcgttgattgctgttgggcaagcctgcgctttttatagc
ttggtatatataacaatcttcactgcaataggtatcagcggtgtccctagaactgttggg
ataattcagccattaatattgtttattctgatagccggttcgcgcgtgagcgcgcgttta
tggcttggtggattgtatgatgaacaattaaagcaaaataaagttaagcgttctctgatt
tatggtgcgggggtagccggacgcgagttggcagcggctcttgcgcataatgttgagatt
aagatcgtaggctttctggatgatgacaaaagtttacatggacgtaaaatacgcggcctg
aatgtatatgaccccaacactatcagtaacatcagcaaaaaaaagaatataagcgaggtt
atgcttgcaatgccgagtgttggccggcaaaggcgtaataagattttatctaaacttcgt
ggagctaatcttgcggtgcggacgcttccaagttactcggatctggctcaagggcgcgta
acagtaaatgacatccgggaactgtctattgatgacattctaggccgtgatattgtcacg
ccagaccccgaattaatgagtgctgatattacagataaagtggtcttgataacaggcgct
ggtggttcgattggtggagaattgtgtaaacaaataatcaagcaaaaaccatcaaagctt
ttgctttttgaacaaagtgaatttgcgctttattctattttgggaagtcttgaaacagca
cttcaagagaatatttccgatgctagctgtgcgctagtgccaattcttggatctgtcact
gacaaaggactattggaaacaacattcaaagaatatcaaccgcagacaatatatcatgcc
gcggcttataagcatgtgccgcttgtagagagtaacccacttgtgggcattcagaataac
gtatttggtactttactttgtgccgaagctgctattgacgctggtgtcaaaaaatttgtc
ctgattagcactgacaaggcagtccgcccaactaatgtaatgggcgcgagcaaacgtatc
gccgaaatgattttacaggcgcttgcagaagaacaagtcacgacaacatttgccatggtt
cgttttggaaatgttctcgattcttctgggtctgttgtaccgctattccgcgaacagata
aaagcaggtggtccagtaacagtgacgcataaggatgtaacccgctacttcatgacgata
tccgaagcggcacaactggttattcaggctggtgcgatgactcaaaccatatcatcaaaa
aaaagtgcacctctatatttattggatatgggctcaccgataaaaatttatgatctggcg
aagcgaatgatagaattgtcagggttgagtctgatttctgactcaatcgcagatggtgat
atagaaataaattttataggtttgagatcaggtgaaaaactttatgaggaattacttatt
ggtgactcagtaatgagtacatcacatccaaaagttaaggttgccaatgaagtgtttttg
agttggggtacattacggggtcatcttgaacaacttgaaacgtcggttgttaacagtgat
ctcgatttgcttcatgctatattggttgcattagtgtcagggtatcaacccaaatcaaat
taa
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