Candidatus Puniceispirillum marinum: SAR116_1988
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Entry
SAR116_1988 CDS
T01207
Name
(GenBank) 6-phosphogluconate dehydratase
KO
K01690
phosphogluconate dehydratase [EC:
4.2.1.12
]
Organism
apb
Candidatus Puniceispirillum marinum
Pathway
apb00030
Pentose phosphate pathway
apb01100
Metabolic pathways
apb01120
Microbial metabolism in diverse environments
apb01200
Carbon metabolism
Module
apb_M00008
Entner-Doudoroff pathway, glucose-6P => glyceraldehyde-3P + pyruvate
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
SAR116_1988
Enzymes [BR:
apb01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.12 phosphogluconate dehydratase
SAR116_1988
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Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
Motif
Other DBs
NCBI-ProteinID:
ADE40231
UniProt:
D5BN38
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Position
2192043..2193872
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AA seq
609 aa
AA seq
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MTLHSVIDAVTDRIRTRSHDSRAAYLASIADMQNDPDSDRRSVSCSNMAHAAAAAGGDQD
DVLAMADKVKPNIGIITAYNDMLSAHQPFEKFPQIIKAAARSVGATAQVAGGVPAMCDGV
TQGRPGMELSLLSRDVIAMSTGIGLSHGVYDAALCLGVCDKIVPGLVMGALSFGHLPTIF
VPAGPMSTGLANDEKAAVRKAYAQGKASRADLLKSEVSAYHGAGTCTFYGTANSNQMLME
IMGLHLPGAAFIHPHDDLRHALTVAATHQAAAISRQSDDYRPIGEVLDERAFVNAIVGLH
ATGGSTNHTLHLPAMAAAAGIELTWEDFADLSEIVPLLARVYPNGSADVNHFHAAGGIGY
VIRELLEAGLLHADARTVWGDSLADYASEPVFGTNNDVVWKPAAGESQDPDILRPVSDPH
SVTGGLKMLTGSLGKSVIKVSAVDASRHIVTAPAKVFTSEAEVKAAFADGALNQDVIVVI
HTQGPQANGMPELHSLTPLLSILQEQGHKVALVTDGRMSGASGKVPAAIHVCPEAVAGGA
IAKIKDGDIITLDAVSGELNVAADLEARPLPAIANQAPQEGFGRSLFASLRGKSAPAEQG
GGVNPLINL
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atgacattacatagcgttattgatgcggtcaccgaccgcatacgtacccgaagccacgac
agccgtgcggcctatctggcatcgattgccgatatgcagaatgatccggatagtgaccgt
cgttcggtatcctgttcgaatatggcgcatgcggcggcggcggctggcggcgatcaggat
gatgtgctggcaatggccgataaagtaaagccgaatataggcatcataaccgcctataat
gacatgctatcagcgcatcagccatttgaaaaattcccgcagattatcaaggccgcggcg
cgctcggttggcgctacagcgcaggttgccggcggcgtgcccgcaatgtgcgatggtgtc
acgcaagggcgccccggaatggaattatcattgctcagccgtgatgtgattgccatgtca
accgggattggcctgtcgcatggtgtctatgacgcggcgctctgccttggtgtttgtgac
aagattgtcccggggctggtgatgggggctttgtcctttggtcatctgccaaccattttt
gtgccagcgggtccgatgtcaactggcctagccaatgatgaaaaagccgctgtccgcaaa
gcctatgcccaaggcaaggcaagccgtgccgatctgctgaaatccgaagtgtctgcctat
catggggctggcacatgcactttctacggcacagccaatagcaaccagatgctgatggaa
atcatgggtctgcatttgcccggtgcggcctttatccatccgcatgatgatcttcgccat
gcgctgacagtggcagcaacgcatcaggccgccgccatttcgcggcagtcggatgattat
cgtccgattggcgaggttctggatgagcgtgcatttgtaaatgccatagtcggcttgcac
gctacaggcggatcaaccaatcatactttgcatctgccagctatggcggcggcggcgggt
attgaactgacatgggaagattttgccgatctgtcagaaattgtgccactattggcgcgt
gtctatcccaatggcagtgctgatgttaatcattttcatgcggctggtggtataggttat
gtgatccgcgagcttctggaagccggactacttcatgctgacgcgcgcacagtctggggt
gacagtctggctgattacgcatccgaacctgtttttggtacgaataatgacgtggtatgg
aaaccggcggctggtgaaagccaagatccggacattctgcgtccagtatcagatccgcat
agtgtgaccggtgggttgaaaatgttgaccggctcgttgggtaaatcagttatcaaagta
tcggcagtagatgccagccgtcatattgtgaccgcaccagcgaaagtgtttaccagtgaa
gccgaggtcaaggcggcctttgccgatggtgcgctcaatcaggatgtgattgttgttatc
catacgcagggtccacaggcgaatggcatgcctgaattgcatagtctgaccccgctatta
tcgattttacaagaacaggggcataaggtagcgctggtaacagacggccgcatgtctggc
gcgtcgggcaaagtgcctgcggcgattcatgtctgccccgaagcggtggcagggggcgct
attgccaagatcaaagatggtgacataatcacccttgatgcggttagcggcgaacttaat
gttgcggctgatcttgaagctcggccattgccagcaattgcaaatcaggcgccacaggaa
ggctttggccggtcattatttgcaagcttgcgtggtaaatccgcaccagcagaacaggga
ggcggggtgaacccgctgataaatctataa
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