Candidatus Puniceispirillum marinum: SAR116_2024
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Entry
SAR116_2024 CDS
T01207
Name
(GenBank) putative transcriptional regulator, GntR family
KO
K00375
GntR family transcriptional regulator / MocR family aminotransferase
Organism
apb
Candidatus Puniceispirillum marinum
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
apb03000
]
SAR116_2024
Transcription factors [BR:
apb03000
]
Prokaryotic type
Helix-turn-helix
GntR family
SAR116_2024
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
GntR
HTH_36
HTH_11
HTH_24
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
ADE40267
UniProt:
D5BN74
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All DBs
Position
2229862..2231400
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AA seq
512 aa
AA seq
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MNEHIIITLDSESGVSLQAQIRQSVVEAILGRSILPGDKLPSSRALSAQLNVSRNTVILA
YQALIDTGYIETRERSGYVVSDDAPISPLVDTPGNDSEALYPVDDMDDVIRPKLADSRAQ
VDWDAKLVQSCSYVRPVQKPVNWREYKYPFVYGQVDNELFSLSEWRDCARQAFGMRNFGT
MVGDFGQHDDPMLVNYICSRSLPRRGIRARPEQILVTLGAQNALYLVAQLIVDASKHVVI
ENPAYPDLRDILLQRTQNIHPLPVDEGGLVLDEGVLRQSDSVFITPSHQCPTTFTMPADR
RRQLLDMARRHDLLIVEDDYEFEMNFLGAPTPALKSQDEDGRVIYVGSLSKSVFPGLRLG
YLVAPEGLISQARALRHLILRHPPGHAQRTLAYFMALGHYDAQIRRLRRHLAGRHTALQN
ALDQEGLFARTGSHFGGTSFWVKGPDWLDARELAQRAAEEGVLIEAGDVFFGRTRPPLNY
FRLAYSAIAAERIPDGIQRLATVMRRMQSQKP
NT seq
1539 nt
NT seq
+upstream
nt +downstream
nt
atgaacgagcatatcatcatcacgctggattctgagtcaggtgtcagtctgcaagcgcaa
ataaggcaaagcgttgtcgaagcgattctgggacgatcaatcctgcctggtgataagctg
ccatcaagtcgcgccttatccgcgcagttgaatgtgtcgcgcaatacggtgattctggcc
tatcaagccttgatcgatacaggctatatcgaaacgcgggaaagatcaggctatgtggtc
agtgatgatgcgccgatatcgccactggttgatacgcccggtaatgatagtgaagcatta
tatcccgttgatgacatggatgatgtgattcgacctaagctagctgatagtcgggcgcag
gttgattgggatgccaagctggtccagtcatgcagttatgtccggccagtgcaaaagccg
gtcaattggcgtgaatataaatatccctttgtctatggtcaggttgataatgaattattc
tcgctgtcggaatggcgtgattgtgctcgacaagcatttggcatgcgcaattttggcacg
atggttggtgactttggtcagcatgatgatccaatgctggtcaattatatatgttcgcgc
agtctgccccgtcgtggaatcagagcgcgtcctgaacaaattctggtcacgcttggggcg
cagaacgcattatatctggtggcgcagttgatcgtcgatgcgagtaagcatgtcgttatc
gaaaatccagcctatcccgatttgcgtgatattctgctacaacgcacgcagaacatccat
ccacttcccgttgatgagggggggctggtgctagatgaaggggtgttgcgtcaaagtgat
tcagtatttatcacgcccagtcaccaatgcccaacaacctttaccatgcctgcggatcgg
cggcggcaactgcttgatatggcgcggcggcatgatctgttgatcgtcgaagatgattat
gaatttgagatgaattttctgggtgcgccaaccccagcgttgaaatcacaggatgaagat
ggtcgggtgatctatgttggcagcctatcaaaatcggtgtttccgggcttgcggttgggc
tatttggtggcaccagaagggctgattagccaagcgcgggctctgcggcatctgatcctg
cgacatcctccaggccatgcgcaacgcacactggcttattttatggcgcttggtcattat
gatgcccagattcgccgcctgcgtcggcatctggccgggcggcatacagcgttgcaaaat
gcgcttgatcaggaagggctgtttgcccgcacaggatcgcatttcgggggtaccagcttc
tgggtcaaagggcctgactggcttgatgcccgtgaattggcacagcgcgccgcagaagaa
ggtgtgctgatcgaagctggagatgtgttctttggcaggacgcggccaccacttaattat
ttccggcttgcctattcggcgattgcggctgaacgcatccctgatggcattcaaaggctg
gctactgttatgcgccggatgcaaagccaaaaaccatga
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