Candidatus Puniceispirillum marinum: SAR116_2042
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Entry
SAR116_2042 CDS
T01207
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
apb
Candidatus Puniceispirillum marinum
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apb03400
]
SAR116_2042
Enzymes [BR:
apb01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
SAR116_2042
DNA repair and recombination proteins [BR:
apb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
SAR116_2042
Prokaryotic type
SAR116_2042
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ADE40285
UniProt:
D5BN92
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All DBs
Position
2251747..2253180
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AA seq
477 aa
AA seq
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MASSIIIHWFRQDLRLADNPSLVAAAQAGDVLPLFILDDDNAGDHKTGAAGRSWLHHALN
ALNMSLDGKLCVMRGDPVDIIPKLVAKVGASGVFWNRCYEPWRIARDKMLKTNLTNNNIQ
VESFNGSLLWEPWTVLKGDGTPYRVFTPFYRRGCLNAAPPRLPLARPDAMQLVADPESSM
SIDALNLLPDHDWGAKMASHWQIGEAAAMTRLHDFVEGGLNGYKDGRNFPARPHTSRLSA
HLHWGEISPNMAWYAAIEKRDQAGFDNDIDVFLSELGWREFSHSLLYHFPHLPRQNLQPK
FDSFPWQSDDNALRAWQQGKTGYPIIDAGMRELWETGYMHNRVRMIVGSFLVKNLLLHWH
HGEAWFWDCLVDADLANNSAGWQWIAGCGADAAPYFRVFNPITQGTKFDADGSYTRRFVP
ELATLPNKYLFSPWEAPALELQAAGITLGKDYPNPIVDVKRSREAALAAFATTRVEP
NT seq
1434 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcatctatcattatccattggttccgccaagatttgcgtctggccgataatccg
tctttggttgcggcggcgcaggctggtgatgtgttgccgctttttatccttgatgatgac
aatgcaggtgatcacaaaacaggtgccgccggacggagttggcttcatcatgcgctgaac
gcgttaaatatgtcactggatggtaaattatgtgtgatgcgtggcgatcctgtcgatatc
atccccaaacttgttgccaaggtcggggcatcgggcgtgttctggaaccgctgttatgaa
ccatggcgcatcgcccgcgacaaaatgttaaagaccaatttgaccaataataatattcag
gttgagagctttaacgggtcgttattatgggagccatggacagttttgaaaggtgatggc
acaccgtatcgcgtctttacgcctttttaccggcgggggtgccttaatgcagccccaccg
cgtttaccgctagccagacccgacgccatgcagttggttgctgatcccgagtcgtctatg
tcgattgatgcgcttaatttgcttccggatcatgattggggcgcgaaaatggcttcccat
tggcagattggtgaggcagccgcaatgacccgtctgcatgattttgtcgaagggggactc
aatggctataaggatggtcgcaattttccagcacgtccacatacgtcgaggctgtcagcg
catctgcattggggggaaatttcgccgaatatggcgtggtatgcggccattgaaaagcgc
gatcaagctggctttgataatgatatagatgtgttcctgtccgaacttggctggcgcgaa
ttttcgcattctctattatatcattttccacatttaccaagacagaatttgcaacccaaa
tttgacagttttccatggcaaagcgatgacaatgctttgcgcgcgtggcaacagggcaaa
accggatatcccatcattgatgctggcatgcgcgaattatgggaaacaggttatatgcat
aatcgggtgcggatgattgtcgggtcatttctggtcaaaaatctgctattgcattggcat
catggtgaagcatggttctgggattgtctggttgatgccgatcttgccaataacagtgct
ggctggcaatggattgccggatgtggcgctgatgcggcaccttatttccgggttttcaat
ccgatcacgcaaggcactaaatttgacgctgatggcagttatacccgccggtttgtgcca
gagttggccaccttgccaaacaaatatcttttcagtccgtgggaagcccccgcgcttgaa
ttacaggctgccggtataacgcttggaaaggactatccaaaccccattgtcgatgtgaag
cggtcgcgtgaagcggcgctggcggcctttgccacgacacgagtcgagccatga
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