Candidatus Puniceispirillum marinum: SAR116_2052
Help
Entry
SAR116_2052 CDS
T01207
Name
(GenBank) transcriptional regulatory protein, LysR family
Organism
apb
Candidatus Puniceispirillum marinum
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
HTH_24
HTH_30
HTH_8
Rv2175c_wHTH
HTH_IclR
HTH_Tnp_ISL3
HTH_AsnC-type
DUF2089
HTH_20
HTH_28
Motif
Other DBs
NCBI-ProteinID:
ADE40295
UniProt:
D5BNA2
LinkDB
All DBs
Position
2260501..2261421
Genome browser
AA seq
306 aa
AA seq
DB search
MSQIEEIRAFVTVVETGSLTQAAERLGIAVSAVSRRLKDLELRLGAPLIQRSTRRMYLNE
TGQRFFSRCRTILDELEAAQQEVQNTEGILSGVLRLNAPLSFGITHITPLITDFMKENPD
VRIDIDLSDKRIDLIAEGFDLAIRIGALQDSSLIAKKISTARQVPCASPDFIAKHGALDN
PEALNDMPGLIYANSRTPSDWTYVTPEGKAGTVHVSQRLSATNGDVLRDAAIAGLGVVNL
PTFLLFEAINDGTLVPLMADHDWSELDIFAVYPKTTILPRRTRAFVDFMAWRFDKNPHWN
QITPKA
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgagtcagattgaagaaatacgtgcttttgtgacggttgtggaaacaggaagccttacg
caggcagcggaacgtcttggtatcgctgtttctgctgtaagtcgtcgtctgaaagatttg
gagcttcgtcttggggcgccattgatccagcgttcgacgcgccgtatgtatctgaacgag
acaggtcaaagatttttcagccgttgccgtactattctggacgagttggaagcggcgcag
caggaagtccagaataccgaaggtattttgagtggtgtcttgcgactgaatgcgccttta
tcatttggcatcacgcatatcacaccactgattactgacttcatgaaggaaaacccagac
gtgcggatcgatatagatctgtcggataaacgcattgatctgatcgccgagggatttgat
ctggcgatacgtattggtgcgttgcaggattccagcctgattgccaaaaaaatatcaacc
gcacggcaggtgccttgtgcatcgccagattttattgccaaacatggtgcgctagacaat
ccagaagctctcaatgatatgcctgggctaatctatgcaaattcccgaacaccatcggat
tggacttatgtaacacccgaaggtaaggcaggaacagtgcatgtaagccagcgtctgtcg
gctacgaatggtgatgtgttgcgcgatgcggccattgccggacttggtgtggttaattta
ccgacatttctgctttttgaagccattaatgatggcacgctggtaccgttgatggctgac
catgactggtccgagcttgatatttttgccgtttatccaaaaacaacaatcttgccgcgc
cggacgcgtgcattcgttgattttatggcctggcgttttgataagaacccgcattggaac
cagatcacgccaaaagcctaa
DBGET
integrated database retrieval system
