Candidatus Puniceispirillum marinum: SAR116_2247
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Entry
SAR116_2247 CDS
T01207
Name
(GenBank) 23S rRNA (Uracil-5-)-methyltransferase rumA
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
apb
Candidatus Puniceispirillum marinum
Brite
KEGG Orthology (KO) [BR:
apb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
apb03009
]
SAR116_2247
Enzymes [BR:
apb01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
SAR116_2247
Ribosome biogenesis [BR:
apb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SAR116_2247
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Cons_hypoth95
TRM5-TYW2_MTfase
MTS
RrnaAD
Methyltransf_25
Methyltransf_31
Motif
Other DBs
NCBI-ProteinID:
ADE40490
UniProt:
D5BP56
LinkDB
All DBs
Position
complement(2464951..2466297)
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AA seq
448 aa
AA seq
DB search
MRRTKRNDGQLPRNAPPLEVEITHIGGRGDGIGSASYTHKYETKTYTIFVPTSLPGEIVL
AQPISINAQGIKTRILELVRQSDQRQTPGCNSFPACGGCNFQHWSRPAIASWKHDLVAHF
LSRHDLEPDQMRPMQSSPPASRRRATFQVKRMKDSAIVGFHERNSHHIVAPDGCVILEPA
LIDLQSALHDFASTHLDAGNVLTAHANLLDNGLCVLLSGQDKWPSSLLAALTDWASKPIF
AGAPLARLSVNDGHVPMLLFAPTPAEIRFGDIGIDPPAGAFLQATQHGEASLQAAVAEIT
AGASRVIDLFAGCGTLSVPLVSQLTHLLAVEQDAASLAALKAGANKAKCGARVKTMQRDL
MNAPIQPVDLDHFDAAIIDPPRNGAAAQCAELALSNIPVIAMVSCNPATFARDAEALTYG
GYRLDWMQIIDQFLFSNHLEIVARFTKI
NT seq
1347 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgaacaaagcgaaatgatggccagcttccgcgcaatgcgcccccactagaagtt
gaaatcacgcatattggcggccgtggcgatggtattggcagtgctagctacacgcataaa
tacgaaaccaaaacatataccattttcgtacctaccagcctgcctggcgaaattgttctt
gcccagcctatcagcatcaatgctcagggcatcaagacacggattctggaactggttcgc
caaagcgatcaacgtcagacaccgggctgtaacagctttccggcctgtgggggatgcaat
ttccaacattggtcacggccagcgattgccagctggaaacatgatcttgtggcgcatttc
ctgtcacgacatgatcttgaaccagaccagatgcgccccatgcaaagctcgcctccagcc
agccggcgacgcgccacctttcaggtaaagcgtatgaaggactcagccatagttggattt
catgaacgcaacagccaccacattgttgcgccggatggctgtgtgattctcgaacccgcc
cttattgacctgcagtcggctttacatgattttgccagcacccatcttgacgctggtaac
gtactaaccgcccatgccaacctcctcgataacggtttatgtgtgttgctatcagggcag
gataaatggccatcttcacttttagcagcgctgactgattgggctagcaaaccaatcttt
gcaggtgcgcccttggcgcgcttatcggtaaatgacgggcacgtgcctatgctgttattt
gccccgacacctgctgaaattcgatttggcgatattggcattgatccgccagcaggtgcc
tttcttcaggcaacgcagcatggcgaggccagcctacaggcggcggtagctgaaatcacc
gcaggcgcatcgcgtgtgattgacctgtttgctggctgcggcacattgagcgtgccgctg
gtcagccagctgacacatttactagctgtcgaacaggacgcggctagtctggccgcgctc
aaggctggcgccaacaaagcaaaatgtggcgcccgtgtcaaaaccatgcaacgcgatctg
atgaacgcacctatccagccagttgatctggatcatttcgatgcggccataattgatccg
ccgcgcaacggtgctgccgcacaatgcgccgaacttgctctatctaatattccggttatt
gcaatggtatcatgcaatccggcaacctttgccagagatgccgaagcgctcacctatggc
ggttatcgtcttgactggatgcagattatcgatcagtttttgttcagcaatcaccttgaa
attgttgcccgctttactaaaatctaa
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