Alpha proteobacterium HIMB59: HIMB59_00000990
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Entry
HIMB59_00000990 CDS
T02249
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
apc
Alpha proteobacterium HIMB59
Pathway
apc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HIMB59_00000990
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apc03019
]
HIMB59_00000990
03110 Chaperones and folding catalysts [BR:
apc03110
]
HIMB59_00000990
03029 Mitochondrial biogenesis [BR:
apc03029
]
HIMB59_00000990
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
apc04147
]
HIMB59_00000990
Enzymes [BR:
apc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
HIMB59_00000990
Messenger RNA biogenesis [BR:
apc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
HIMB59_00000990
Chaperones and folding catalysts [BR:
apc03110
]
Heat shock proteins
HSP60 / Chaperonin
HIMB59_00000990
Mitochondrial biogenesis [BR:
apc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
HIMB59_00000990
Exosome [BR:
apc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
HIMB59_00000990
Exosomal proteins of other body fluids (saliva and urine)
HIMB59_00000990
Exosomal proteins of breast cancer cells
HIMB59_00000990
Exosomal proteins of colorectal cancer cells
HIMB59_00000990
Exosomal proteins of bladder cancer cells
HIMB59_00000990
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
EAD9
Motif
Other DBs
NCBI-ProteinID:
AFS48303
UniProt:
J9YXM8
LinkDB
All DBs
Position
complement(91603..93258)
Genome browser
AA seq
551 aa
AA seq
DB search
MSAKLIQFGTDARAKMLKGINILADAVKVTLGPKGRNVVIDKSFGSPRTTKDGVTVAKEI
ELADKFENMGAQMIKEVASKTNDLAGDGTTTSTVLCQALATEGMKAVAAGLNPMDLKRGM
DTAADAIIKELQKNSKAVKSDKEVQQVGTIASNGDDEVGQMISHAMQKVGKEGVITVEEA
KSLDTELDVVEGMMFDRGYLSPYFVTNADKMKAEMDDCLILLHEKKLSSLQPMLPLLESV
VQSSKPLLIISEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLEDIAILTGGQV
ISEDLGIKLESVTMDMLGKAKRVVVDKENSTIVGGAGKKKDIEARCDQIRKQIDETTSDY
DREKLQERLAKLAGGVAVIKVGGASEVEVKEKKDRVEDAMHATRAAVEEGILPGGGTALL
YATNVLKNLKVENDDQRYGVDIVRRALSAPLKQIAQNAGHDGAVIAGKILESKDNSYGFD
AQSGKFCDLVKAGIVDPTKVVRTALIDAVSVAALLTTTEAMITDKPEDKSAPAMPDMGGM
GGMGGGMPGMM
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcaaaattaattcaatttggcacagacgctagagcaaaaatgctcaaaggtatt
aatatcttagcagatgctgtcaaagttacattaggcccaaagggtagaaacgttgtgatc
gataaatcttttggctctccaagaactacaaaagatggtgttacggttgcaaaagaaatc
gagctcgccgataaatttgaaaatatgggcgcacagatgattaaagaagtagcaagcaag
acaaacgatttagcaggtgatggcacaacaacttcaactgttctatgccaagctctagct
acagaaggaatgaaagcagttgcagcaggtctgaacccgatggatttaaaaagaggtatg
gataccgcagcagatgctattatcaaagaacttcaaaaaaactcaaaagctgtaaagtct
gataaagaagtacaacaagtaggtacaattgcatctaacggtgatgatgaagtcggtcag
atgatttcacatgcaatgcaaaaagttggcaaagaaggtgtaatcacagttgaagaagca
aaaagcctagatacagaattagatgtagtagaaggtatgatgttcgatcgtggttatcta
agcccttattttgtcactaatgctgataaaatgaaggccgaaatggatgattgtttaatt
cttttacatgaaaagaagttatcaagcctacagccaatgcttcctcttctagagtcagtg
gttcaatcaagcaaaccacttttaatcatctcagaagatgttgaaggagaagctcttgct
actcttgtggttaataagctacgtggaggattaaaaatagctgctgttaaagcgcctggt
tttggtgatcgaagaaaggcaatgttagaagacattgcaattctaactggtggtcaagtg
atcagcgaagacttaggtatcaaacttgagtctgtaacaatggatatgcttggaaaagca
aagagagttgttgttgacaaagaaaactcaaccatcgttggtggtgcgggtaagaaaaaa
gatatcgaagcgcgttgtgatcaaattaggaaacaaattgatgagacaacatctgactac
gatagagaaaagttacaagaaagattagcaaaacttgctggtggtgtagctgtgattaaa
gttggtggtgcttctgaagtagaagttaaagagaaaaaagaccgagtagaagatgcaatg
cacgctacaagagctgcagtagaagagggcatcttacctggtggtggaacagctctttta
tatgctacaaacgttcttaaaaatctaaaagttgaaaatgatgatcagcgatacggtgtt
gatatcgttagaagagctctatctgcacctttaaaacaaattgcacagaatgcaggtcat
gatggcgcggtgattgcaggtaaaatcttagagagtaaagataactcttatggttttgat
gctcaatccggtaaattctgtgatttagttaaagcaggtattgttgatccaactaaagtt
gtaagaacagctcttattgatgctgtgtcagtggctgctcttttaactacaactgaagca
atgattacagataagcctgaagataaatctgctcctgcgatgcctgatatgggcggaatg
ggtggcatgggtggcggtatgccaggcatgatgtaa
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