Alpha proteobacterium HIMB59: HIMB59_00001560
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Entry
HIMB59_00001560 CDS
T02249
Name
(GenBank) FAD-binding protein, DNA photolyase family,DNA photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
apc
Alpha proteobacterium HIMB59
Brite
KEGG Orthology (KO) [BR:
apc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apc03400
]
HIMB59_00001560
Enzymes [BR:
apc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
HIMB59_00001560
DNA repair and recombination proteins [BR:
apc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
HIMB59_00001560
Prokaryotic type
HIMB59_00001560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AFS48360
LinkDB
All DBs
Position
complement(140351..141796)
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AA seq
481 aa
AA seq
DB search
MPYRIHWFKKNLRFQDNEILLKKDNSSSILLYIIEPELWLQKDMSQRQWDFIWESVESLK
TDLAKHNLHLNILSGDAAEIFQSLHQKYSFTEVISEQETGIHWTFERDKKLKSLFNNLNV
NWIEYPYFGVKRGNHNRDHWAGSIQQIFKKPLINIEKYIDQSEILDFDEHEKPVNFYDKT
PCPFRQKGGSHQAHDLLDTFLECRGENYQSEMSSPITAEHSCSRLSPHFAHGTLSLRQAF
QLAEKKRFEIQSTNKVFAKSINAFLSRLYWRSHFIQKLEDEPSIELKSFIPLYDDIRDQD
EEKLQSWIKGETGIPFIDACMIYLRNHGWINFRMRAMLASFAAYNLWLDWRYYAPPLAAL
FTDFEPGIHYSQIQMQSGTTGINTIRMYNPYKQSEEQDPDAHFIINNIPSYKNVPKNLLH
YPETVTPFEQQLLPSTWKSPIVNVSQSSKKAKDTIYGIRKMIDHKTLAKSVFLKHGSRKS
H
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgccctatcgaatacactggtttaaaaaaaatcttcgatttcaagataacgaaattcta
ttaaagaaagataattcttcttcaattttgctttacattattgagccagaactttggtta
caaaaagacatgtctcaaagacaatgggactttatttgggaaagtgtagagtcattaaaa
acagatttagcaaagcataacctgcatttaaatattctctccggagatgccgcggagata
tttcaatcacttcatcaaaaatatagcttcactgaagtaatcagcgagcaagaaacaggt
atccattggacttttgagcgagataaaaagctaaaatcactattcaacaacttaaatgtc
aattggattgagtatccttatttcggagtaaaaagaggtaatcataatcgagatcattgg
gctggatccatacagcaaatctttaaaaaaccactgataaacatagaaaaatatatcgat
caaagtgaaattttagattttgatgaacatgaaaaacccgtaaatttttatgataaaacc
ccatgtcctttcaggcaaaagggaggcagtcatcaagctcatgacttattggacactttt
ttagagtgtaggggagagaactatcaaagtgaaatgtctagtcctattacggccgagcat
agctgttctcgactatcccctcattttgctcatgggactctttcactacgacaagcattt
cagcttgcagaaaaaaaaagatttgagattcaatcgactaataaagtttttgccaaatcc
atcaatgcctttctttcacgattatattggagatcacattttattcaaaaattagaagat
gagcctagtattgagctgaaaagctttatccctctttatgatgatattcgtgatcaagat
gaagaaaaacttcaatcatggatcaaaggagaaacaggtattccatttattgatgcctgc
atgatttacttaagaaatcatggatggattaattttcgtatgagagcgatgcttgcttct
tttgctgcttataatttatggcttgactggagatattatgctcctcctctagcagcactt
tttacagattttgaaccaggaattcattacagccaaatccagatgcaatcagggacaaca
ggtatcaatacaattagaatgtacaacccttataaacaatctgaagaacaggacccagat
gctcattttattatcaacaatattccaagttataaaaacgttcccaaaaacttattacat
tatccagagacggtgactccttttgagcaacaactccttccatccacatggaagagcccg
atagttaatgtcagtcagtcatccaaaaaagcaaaggatactatttatggtatcaggaaa
atgattgatcataaaacattagcaaaatcagtatttttaaaacatggaagtcgaaaatct
cattga
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