Alpha proteobacterium HIMB59: HIMB59_00001700
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Entry
HIMB59_00001700 CDS
T02249
Name
(GenBank) oligopeptide/dipeptide ABC transporter, ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02034
peptide/nickel transport system permease protein
Organism
apc
Alpha proteobacterium HIMB59
Pathway
apc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
apc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HIMB59_00001700
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
apc02000
]
HIMB59_00001700
Transporters [BR:
apc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
HIMB59_00001700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
ABC_tran
oligo_HPY
AAA_21
OppC_N
AAA_22
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AFS48374
LinkDB
All DBs
Position
complement(153120..154991)
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AA seq
623 aa
AA seq
DB search
MINFLKIVAKNRLAAFGGILLLIILTLSILAPILPLKEPNITNTADRFMVPFEGGHILGT
DHLGRDLLSRLLWGTQLSLAVGFAAAFIAATFGSILGAIAGFYGQKTDNIIMRFIDMLMA
FPYILLALAIVAALGPGLFNALIAVALVNIPFFARNIRGVTVTLANKEFIEAARLSGMSN
LRILIVEIFPNLLPMIVIAMSTTVGWMILETAGLSFLGLGSQPPQADLGSMLGEARSALI
TNPHTSFVPGIMIFCIVIGINLFGDGVRDALDPRLKKGNLIRPLPQTIYEGGDTQPQPST
KLLSVQNLSTQFHVNQDVYQSSNDVSFEIQEGECLGLIGESGSGKSVTALSVTSLVASPP
GVIKKGSVNYKNQNLLALPYEKLRSIRGNKISYIFQDPLTTLHPLHTIGDQLLEALQAHD
SKLSASGSISKSKDLLKSVQIPNPDNVWDVYPHQLSGGMRQRVCIAMALINDPELIIADE
PTTALDVTVQAQILNILNSLRKERKLSILFISHDFGVISQLCDRVIVMYAGSIVEEGPVK
NIMQQAAHPYTSELIKCVPQLGNKEHALHSIPGIPPSLNQLPEGCAFANRCQYKQDQCLK
ESVPVSSKDNRSYKCFYPVGGAA
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgatcaactttcttaaaatcgtagctaagaacagactcgccgcttttggaggaattctc
cttttaattattttaaccctttccattcttgctcccatcctacctcttaaagaaccgaac
atcaccaatacggcggatcgcttcatggtcccctttgagggaggacatattttaggcact
gatcacttaggacgagatcttctctctcgacttttatggggaacacagttgagcttggca
gttggatttgcagcggcattcattgcagccacttttggctcaattttaggcgctattgct
gggttttatggccaaaagactgacaatattatcatgcgcttcatcgatatgttgatggcc
tttccttatatactcttagctcttgctattgtagcggcgctgggtccaggattgtttaat
gccttgatagcggtggctctggtgaacatccctttctttgcccgtaatatccgaggtgtc
accgtcaccttggccaataaagaattcattgaggcagccagattatcagggatgagtaat
ctgagaattttgattgttgagatattcccaaacctccttccaatgatcgttattgctatg
tcgactactgtgggttggatgattttagagacggcgggtctttcttttttaggattgggc
tcccagccccctcaagccgatctaggatcgatgctgggtgaggctcgaagtgcactcatc
accaatcctcatacatcatttgttcccggtatcatgatcttttgtattgttattggtatc
aatttattcggagatggtgtgagagatgcattggaccctcgactaaaaaaaggaaacctc
atccgacctcttcctcaaaccatttatgagggaggagacacccaacctcaaccttccacc
aaattattatccgttcaaaatttatctacacagtttcatgtcaaccaagatgtctatcaa
tcatccaatgatgtctcttttgaaattcaggagggtgagtgtttgggtttaattggagag
agtggctcaggcaaatccgttaccgctctgtcggtgactagtcttgtcgcgtcgccaccc
ggggtaattaaaaaaggatctgtaaattacaaaaaccaaaatcttctggctctgccttat
gagaagctgcgatctattcgaggtaataaaatctcttatatcttccaagaccctctgact
actttgcatcccctacacaccattggagatcaacttctagaagctttgcaagcacatgac
tccaaactctccgcttcagggtccatctcgaaatccaaagatttattgaagtcagttcaa
atccccaaccctgataatgtctgggatgtctaccctcatcaactctctggagggatgcgc
cagcgtgtttgcattgctatggctttaatcaatgacccagaattgattattgctgatgag
cccaccactgcattagacgttaccgttcaagctcaaattcttaatattctcaatagtctt
cgaaaagagcgaaaactctccattctcttcatttcccatgattttggcgttatttctcaa
ctttgtgaccgcgtgattgtgatgtatgccggctcaattgtagaagagggcccggtcaaa
aatattatgcaacaagctgctcacccctatactagtgagttgatcaagtgcgttcctcag
ctcggtaataaggaacatgctctgcacagtattccgggaattcctccttcattaaatcag
cttcctgaaggatgtgcttttgctaatcgatgccagtacaaacaagatcagtgccttaag
gagtcagtgcctgtcagctctaaagataatcgatcctataaatgtttctatcccgtagga
ggtgctgcatga
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