Alpha proteobacterium HIMB59: HIMB59_00002240
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Entry
HIMB59_00002240 CDS
T02249
Name
(GenBank) pseudouridylate synthase I
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
apc
Alpha proteobacterium HIMB59
Brite
KEGG Orthology (KO) [BR:
apc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
apc03016
]
HIMB59_00002240
Enzymes [BR:
apc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
HIMB59_00002240
Transfer RNA biogenesis [BR:
apc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
HIMB59_00002240
Prokaryotic type
HIMB59_00002240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Pus10_C
Motif
Other DBs
NCBI-ProteinID:
AFS48427
LinkDB
All DBs
Position
complement(200022..200759)
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AA seq
245 aa
AA seq
DB search
MTNIKLTIEYHGLPYSGWQSQKNEKTVQDEVQKAIFKFSGEKKIIQGAGRTDAGVHALAQ
CANFILEKDFSEYQILSGINFHLGNEKIKITQVEKVDDDFNARFTAKLKTYHYQIYNSTS
PSVLQDEISVHIRQPLNVVAMREAIQNFIGKHDFSSFRARGCQAKTPIRSINKTDIVQED
KKITFIFQAQSFLYQQIRIMVGSLLEVGLNNQNPSWIADLLNQKNRSLAGPTMPSKGLLL
KDIQY
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgactaatataaaattaacaattgaataccatggtcttccttattcgggatggcagtct
caaaaaaatgaaaaaacagttcaagatgaagttcaaaaagcaatttttaaattctcaggt
gaaaaaaaaattattcagggcgccgggagaactgatgccggtgttcatgctttagcgcaa
tgtgctaattttatattagaaaaagattttagtgagtatcaaattttaagtggtattaac
tttcatcttggaaatgaaaaaattaaaattacccaggtagaaaaagtagatgatgatttt
aatgcaagatttacagcgaagcttaaaacttatcattaccaaatttataattctacctcc
ccatcagtattgcaggatgaaattagcgttcacataagacaacctcttaatgttgttgcc
atgagagaagcaattcaaaatttcataggtaaacatgattttagttcttttcgagcgaga
ggatgccaagcaaaaacaccgattagatctataaataagactgatatagttcaagaagat
aaaaaaataacctttatttttcaggcacaatctttcctttatcagcaaatcagaattatg
gtaggtagcttactagaggttggtttgaataatcaaaacccttcctggattgctgatcta
ttaaaccaaaaaaaccgttctttagcaggtccaactatgccttccaaaggattacttctt
aaggacattcagtattga
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