Alpha proteobacterium HIMB59: HIMB59_00002670
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Entry
HIMB59_00002670 CDS
T02249
Name
(GenBank) succinate dehydrogenase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
apc
Alpha proteobacterium HIMB59
Pathway
apc00020
Citrate cycle (TCA cycle)
apc00190
Oxidative phosphorylation
apc00650
Butanoate metabolism
apc00720
Other carbon fixation pathways
apc01100
Metabolic pathways
apc01110
Biosynthesis of secondary metabolites
apc01120
Microbial metabolism in diverse environments
apc01200
Carbon metabolism
Module
apc_M00009
Citrate cycle (TCA cycle, Krebs cycle)
apc_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
apc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
HIMB59_00002670
00650 Butanoate metabolism
HIMB59_00002670
09102 Energy metabolism
00190 Oxidative phosphorylation
HIMB59_00002670
00720 Other carbon fixation pathways
HIMB59_00002670
Enzymes [BR:
apc01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
HIMB59_00002670
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
GIDA
Thi4
Pyr_redox_2
HI0933_like
FAD_oxidored
Lycopene_cycl
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
AFS48470
UniProt:
J9YZP2
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All DBs
Position
complement(243896..245677)
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AA seq
593 aa
AA seq
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MSNYTDHILDVVVLGAGGAGLRAALGCSEQGLKTACVSKVYPTRSHTVAAQGGIGAALGN
MGEDSWQWHMFDTVKGSDWLGDQDSIEYLCSNAVDSIVELEHYGMPFSRTEDGKIYQRPF
GGHMTNNGKGDPASRACAAADRTGHALLHTLYQQSLKNDVQFFNEFYAIDLLKDSSGEIC
GLLALSIEDGSLHRFIAKMTILATGGYGRIFQSSTSAHICTGDGAGIALRAGLPLSDMEF
IQFHPTGIYGVGVLISEAARGEGGVLKNSEGTRFMLEYAPNAKDLAARDVISRFISKEIS
AGRGCGPNKDYINLHLEHLDADMLAKRLPGISESVKAFCGRDVSKEPIPVVPTVHYCMGG
VPTNFKAEVLKPTSDNSEEVCPGLMAIGEAACASVHGANRLGTNALAELVVFGRGAAIQA
GQVINPSESNKMPSDASTQEIIDRLHSIKNNSGDISVGELRDKMQKTVQKRFGVYRESEA
LSLGNQELSDMYKDLKHVKIVDKSDIFNTDLIEALELHNLMEVAGSVGVSAEQRTESRGA
HAREDYPDRDDENWMKHTLAWKDNDQFNITHRPVRMTTLSNQISVIQPQVRVY
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atgagtaattatactgatcacatattagatgttgttgttcttggagccggaggcgctggc
ttaagagcagccttaggttgctctgaacaaggattaaaaacagcttgcgttagtaaagtt
taccctacacgaagtcacaccgttgctgctcaaggaggcattggtgcagcccttggaaat
atgggcgaggacagctggcagtggcatatgtttgatactgtcaaaggatctgactggtta
ggagatcaagatagtattgagtatctatgctcaaatgccgttgattctattgtcgaatta
gagcattacggcatgcctttttctcgaaccgaagatggaaaaatttatcaaagaccattt
ggtggtcatatgactaacaatggtaaaggagatccggcgagtagagcttgtgcggcggct
gatcgaaccggacatgcgcttcttcacacgctttatcagcaaagccttaaaaatgatgtt
caattttttaacgagttttacgccatcgatcttcttaaagatagtagtggagagatttgt
ggtcttttggccctatccattgaagatggtagtcttcatcgatttatcgcaaagatgacc
attcttgcgactggtggttacggtcgtatttttcaatcctctactagtgcacatatttgt
acgggagatggagcaggcatagctcttagagcaggtcttcctttatcagacatggaattt
attcaatttcatccgacaggcatttatggtgttggggttttaatatcagaggccgctagg
ggtgaaggtggagttttaaaaaatagtgagggcacgcgttttatgttggagtacgcaccc
aacgcaaaagacttagctgcgcgtgatgttatctcaagatttatcagtaaagaaatcagt
gctggccgtggttgcggtccgaataaagattatatcaaccttcatcttgaacatttagat
gccgacatgttagccaaaagattgcccggtatctcagagtcagtaaaagctttttgtgga
cgtgatgtttctaaagagcctattcctgttgtcccaactgttcattattgtatgggcggt
gttcccactaactttaaagcagaagtattaaaacccacttctgataattctgaagaagtc
tgtccaggcttaatggctattggggaggcagcttgtgcttcggttcatggagctaatcgt
ttagggacaaatgctttagcagaacttgtcgtgtttggtcgaggtgcagctatccaggcg
ggccaggttattaatccatcggagtctaataaaatgccgtccgatgcttcgacacaggaa
attatcgatcgacttcactcaattaaaaataattcaggagatatttctgttggagagttg
agagacaaaatgcaaaaaacagttcaaaaaagatttggtgtgtaccgtgaaagtgaagct
ttatcgctaggtaatcaagaattaagcgatatgtataaagatcttaaacacgtcaaaatt
gttgataaatctgatatttttaacactgatttaatcgaggctttagagcttcacaatttg
atggaagttgccggaagtgtcggcgtatccgctgaacaacgcaccgaaagtcgaggcgcc
catgcaagagaggactatcctgatcgagatgatgagaactggatgaagcacacattagcc
tggaaagacaatgatcaatttaatatcactcatcgcccagttcgtatgaccacattaagt
aatcagatttctgttattcaaccccaagtgagagtttattaa
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