KEGG   Alpha proteobacterium HIMB59: HIMB59_00002950
Entry
HIMB59_00002950   CDS       T02249                                 
Name
(GenBank) signal recognition particle subunit FFH/SRP54 (srp54)
  KO
K03106  signal recognition particle subunit SRP54 [EC:3.6.5.4]
Organism
apc  Alpha proteobacterium HIMB59
Pathway
apc02024  Quorum sensing
apc03060  Protein export
apc03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:apc00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03060 Protein export
    HIMB59_00002950
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    HIMB59_00002950
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HIMB59_00002950
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:apc02044]
    HIMB59_00002950
Enzymes [BR:apc01000]
 3. Hydrolases
  3.6  Acting on acid anhydrides
   3.6.5  Acting on GTP to facilitate cellular and subcellular movement
    3.6.5.4  signal-recognition-particle GTPase
     HIMB59_00002950
Secretion system [BR:apc02044]
 Sec (secretion) system
  Prokaryotic Sec-SRP core components
   HIMB59_00002950
  Eukaryotic Sec-SRP protein
   HIMB59_00002950
SSDB
Motif
Pfam: SRP54 SRP_SPB SRP54_N AAA_22 Zeta_toxin AAA_33 6PF2K AAA_17 AAA CbiA XFP YqeC DUF4947 AAA_30 Polo_box_3 cobW NPHP3_N
Other DBs
NCBI-ProteinID: AFS48497
UniProt: J9YZG9
LinkDB
Position
complement(271509..272861)
AA seq 450 aa
MLENITNKITGIFQGLSNKGAITEKDLDTTLREVRVALLEADVSLKVSKDLIKNIQEKAL
GQKVIENVQPGQQIIKIVSDELTEILGSQSSELNFKNKPSVFLMCGLQGAGKTTSIAKLA
HYCQNTLNKTVSLVSTDLRRPAAIEQLRVLAQKNNIQFIEPSSEDVKDIVQTALNQSEKL
LSDILIIDTSGRISTDEELLIELKTIYELAKPQENLLVLDSMMGQQALSVVEAFHQTAPL
TGFILTRLDADPRGGVALSAKYQTGLPIRFFGSGENITDFEVFHPDRIASRILGMGDVVS
LVEKAQKDFDNKEMENLQAQMMSGKFNMEGMLKQFLQMKKMGGMSGLMSYMPGVGKIKSM
MENADFDEKIIDHQIAIIRSMTKQERSDPDILKASRKRRIASGSGRQVHEVNRLLKQFEQ
TKKMMKQAQKPGFANKIKNLLGGNQMPTIE
NT seq 1353 nt   +upstreamnt  +downstreamnt
atgctagaaaatataacaaataaaattacagggatattccaaggcctctctaataaggga
gctattaccgaaaaggatttagacacaacccttcgtgaagtgcgagtcgcgttactagag
gcagatgtttcattaaaagtttccaaagatctcatcaaaaatattcaagaaaaagctctt
gggcaaaaagtaatcgaaaatgttcagcctggtcagcaaattattaaaattgttagtgat
gagttaaccgaaattttaggcagtcaaagtagtgaattaaatttcaaaaacaaaccttcc
gtgtttttaatgtgcggtctgcaaggtgctggtaaaactacctcaattgcgaagttggca
cattattgtcaaaacactcttaataaaacagtctccctagtatctactgacttaagaaga
ccagcggcgattgagcaattaagagtattagcccaaaaaaataatattcaatttattgaa
ccctctagtgaagatgtaaaagacattgttcaaaccgctctcaaccaaagtgaaaagctc
ctctctgacatacttattattgatacctcaggtagaattagtaccgatgaagaattactt
atagaactcaaaactatttatgaattagcaaagccccaagaaaatcttcttgttcttgat
tctatgatgggtcaacaagcattaagtgttgttgaggcttttcatcaaacggccccactg
acgggttttattcttacgagacttgatgctgatcctagagggggtgttgccctctcagcg
aaatatcaaacaggattgccaattcgtttctttggatccggagaaaatattacagatttt
gaagtattccatcctgatcgcatagcctccagaatattaggaatgggcgatgtggtttcc
ttagtagaaaaagcacaaaaagattttgataacaaggaaatggaaaacctccaagcgcaa
atgatgagcggaaaatttaatatggagggaatgctaaaacaatttttacaaatgaaaaaa
atgggcggcatgtctggcttaatgtcctatatgccaggtgttgggaaaattaaaagcatg
atggaaaatgcagatttcgatgagaaaattatcgatcatcaaattgcaataatacgatca
atgactaaacaagaacgttctgatcccgatattttaaaagcatcccgaaagagaagaata
gcctcgggctctggaagacaggttcatgaagtcaacagacttcttaaacaatttgagcaa
actaaaaaaatgatgaaacaagctcaaaaacctggtttcgctaacaagattaaaaatctt
ttaggtgggaaccaaatgccaacgattgaataa

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