Alpha proteobacterium HIMB59: HIMB59_00003800
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Entry
HIMB59_00003800 CDS
T02249
Name
(GenBank) DNA polymerase III, epsilon subunit
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
apc
Alpha proteobacterium HIMB59
Pathway
apc03030
DNA replication
apc03430
Mismatch repair
apc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HIMB59_00003800
03430 Mismatch repair
HIMB59_00003800
03440 Homologous recombination
HIMB59_00003800
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apc03032
]
HIMB59_00003800
03400 DNA repair and recombination proteins [BR:
apc03400
]
HIMB59_00003800
Enzymes [BR:
apc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HIMB59_00003800
DNA replication proteins [BR:
apc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HIMB59_00003800
DNA repair and recombination proteins [BR:
apc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HIMB59_00003800
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AFS48580
UniProt:
J9YZZ4
LinkDB
All DBs
Position
346419..347099
Genome browser
AA seq
226 aa
AA seq
DB search
MREIILDIETSGLDYKEGHRIIEIGCVELNKKEVGSHFHRYINPLKTLTEENIKIHGITN
EFLEDKPLFEDVAEEFLSFIQDSSIIAHNANFDVGFLNYELEKLSKPQISKDRVVDTVVI
ARNRFPGQQVNLDALVKKLKVNTLVDREFHGALKDAKILTDVYLELQGINQMGLQLNERK
TEDLNLSGELNLTQIVLTKDETEAHKEFIKNNIPKSNWAKVDKNYE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgagagaaataattttagatatagaaacatcagggcttgattacaaagaaggccaccgc
atcattgaaataggctgtgttgaactaaacaaaaaagaagtcggctctcacttccataga
tatatcaaccctctaaaaactttaacggaggaaaacatcaaaattcacggaattactaat
gaattccttgaagataagccattatttgaagatgttgccgaagaattcttaagtttcatt
caagacagttcaattatcgcccacaatgcgaatttcgacgtgggtttccttaattatgaa
ctggaaaaattatccaaaccccagatatccaaagacagagtggtcgatactgtggttatt
gccagaaatcgatttccaggtcaacaagtaaatttagatgctttagttaaaaaattaaaa
gtaaacacgttggtggatagagaatttcacggagctttaaaagatgcaaaaattttaaca
gatgtatatttggagctacaaggtatcaaccaaatgggtttacaacttaacgaaagaaaa
acagaagatttgaacttatctggagaattaaatttgactcaaattgtcttaacaaaagac
gagacagaggcgcataaagagtttataaaaaataatatacccaaatcaaattgggcaaaa
gtagataaaaattatgagtag
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