Alpha proteobacterium HIMB59: HIMB59_00007080
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Entry
HIMB59_00007080 CDS
T02249
Name
(GenBank) Uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
apc
Alpha proteobacterium HIMB59
Pathway
apc03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
apc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HIMB59_00007080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apc03400
]
HIMB59_00007080
Enzymes [BR:
apc01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
HIMB59_00007080
DNA repair and recombination proteins [BR:
apc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HIMB59_00007080
Prokaryotic type
HIMB59_00007080
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AFS48906
LinkDB
All DBs
Position
complement(658184..658861)
Genome browser
AA seq
225 aa
AA seq
DB search
MDTSTIQLHPSWLDHLKDEFQKDYMLLIKQKLLELKKNNIPFYPPGRFLFSAFNLTPLDQ
VKVVILGQDPYHGPHQAHGLCFSVPDGIKPPPSLINIFKELEDDIDKKMDFSNGNLEHWA
KQGVFLLNTTLTVERSKPLSHQKLGWDIFTNKVISTISKARENIVFILWGSFAQSKKELI
DSNKHLILTAPHPSPLSAHRGFFGSKPFSKTNNYLESKQIDMINW
NT seq
678 nt
NT seq
+upstream
nt +downstream
nt
atggatacttctaccattcaacttcacccttcttggttagatcatcttaaagatgagttt
caaaaagactatatgctactcattaagcaaaaacttttagaattaaaaaaaaataatatt
cctttttatccaccgggaagatttctttttagtgcgttcaacctgacgcccttagatcaa
gtaaaagttgtcattttaggtcaagatccttatcacggtcctcatcaagcacatggttta
tgcttttccgtacctgatggtataaaaccgccaccttctttgattaatatattcaaagag
ttagaagacgatattgacaaaaaaatggatttctctaatgggaatttagaacactgggca
aagcaaggtgtttttttattaaataccacacttacagttgagagatcaaagccgttatct
catcaaaaactgggatgggatatttttacaaataaagttatttctacgattagtaaagcc
cgcgaaaacatagtttttattctttggggatcatttgctcaaagcaaaaaagaattaata
gattcgaataaacacctaattttaaccgcaccccacccctctcctttatcggctcatcgc
ggtttttttggcagcaaacccttctcaaagacaaataactatcttgagtccaaacaaatt
gatatgattaactggtaa
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