Alpha proteobacterium HIMB59: HIMB59_00009750
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Entry
HIMB59_00009750 CDS
T02249
Name
(GenBank) exodeoxyribonuclease VII, small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
apc
Alpha proteobacterium HIMB59
Pathway
apc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
apc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HIMB59_00009750
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apc03400
]
HIMB59_00009750
Enzymes [BR:
apc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
HIMB59_00009750
DNA repair and recombination proteins [BR:
apc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
HIMB59_00009750
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
CDH1_2_SANT_HL1
GIT_CC
DUF5667
TTC3
Motif
Other DBs
NCBI-ProteinID:
AFS49166
UniProt:
J9Z283
LinkDB
All DBs
Position
897336..897560
Genome browser
AA seq
74 aa
AA seq
DB search
MNKKNEKSFEDALQRLEEIAQLLENEETPLEDSIKLFEEGIELKDFCEEKLKSAKLKINK
IIKKNKDLVNEDFE
NT seq
225 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaaaatgaaaaatcttttgaagacgcccttcaaagactagaggaaatagct
caattgcttgaaaatgaggaaacacctcttgaagatagtattaaattatttgaagaggga
attgagttaaaagacttctgtgaagaaaaattaaagtcagctaaattaaaaataaataaa
attattaaaaagaataaagatctggttaacgaggatttcgaataa
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