Alpha proteobacterium HIMB59: HIMB59_00011020
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Entry
HIMB59_00011020 CDS
T02249
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
apc
Alpha proteobacterium HIMB59
Brite
KEGG Orthology (KO) [BR:
apc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apc03032
]
HIMB59_00011020
03400 DNA repair and recombination proteins [BR:
apc03400
]
HIMB59_00011020
Enzymes [BR:
apc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HIMB59_00011020
DNA replication proteins [BR:
apc03032
]
Prokaryotic type
DNA Topoisomerases
HIMB59_00011020
DNA repair and recombination proteins [BR:
apc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HIMB59_00011020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
SIS
Motif
Other DBs
NCBI-ProteinID:
AFS49286
LinkDB
All DBs
Position
1001204..1003870
Genome browser
AA seq
888 aa
AA seq
DB search
MAKKKKTKSKQLDVLDDKVYPNIDITDELEKSYLDYAMSVIVSRALPDIRDGLKPVHRRI
LYSMYESSYHHNKPYKKSARIVGDVMGKYHPHGDSAIYESMVRMAQDFTMRLPLIDGQGN
YGSMDGDPAAAMRYTEARLDKVSSFMLEELEYDTVQLRPNYDETLTEPKVLPSRFPNIFV
NGASGIAVGMATNIPPHNLGEIIDATLLLVDEPDSTSKQLHKIVKGPDFPTGGIISGTAG
LNSMYETGRGSVTVLSKLHEEKIKTRNAIVITEIPYLQNKSKLLERIADVVNNKTIEGIN
DIRDESNKEGVRIVIELKSSAVPEIIKNQLFQYTPLKTSFSSNMLALKETKPLTLNLRDG
LSHFIDFRKDVITKRTVYKLNKAREKANILIGLSIAVNNIDAVIDLIKKSKTPAEAKQKL
LSTKWAAKSNITQYIKLINPSFKSSSSKISLDEEQAKAILELRLQKLTALERDDLFNNLK
SLVDDINSYLKILNSDKQLLKVLKDELNEIKDNFATPRKTEIQKHDIEEVDTEDLIVEED
VVITVSHQGYIKRVLKSSYKVQKRGGKGKNAMTTRDEDFLEQVFAATTRDTILFFTSVGK
VYSMKAYELPAGTPTSRGKAIVNLIPISKNEKISSILTLPKDIGDFENYNLVFATSLGNI
RKNKLKDVAMSGTRKLARTGKTAIKLKTGDRLIGVISVIENDDVQLATTNGKSIRFATKD
LREFSGLGSAGVRGIKLAKDDKVVSICSLVHNKISIDVRESYLKAKNEAKKDASKMNKKF
QELAESEEYLLSITENGYGKLSSAYEYRITNRGGSGVTNITITPKNGRVVQSLKVNLDDN
IALISDSGKLLRCNVGENIRVVGRVSQGVSVFKVDSKEKIVSVARLED
NT seq
2667 nt
NT seq
+upstream
nt +downstream
nt
ttggccaaaaagaaaaaaactaaatcaaaacaattagacgtattagacgataaagtttat
ccaaatatagacatcactgatgaattagaaaaaagttatctagactatgctatgagcgtc
attgtatcgagagcgctccctgatattagagatggtttaaaaccagttcatcgaagaatt
ttgtattcgatgtatgagtcttcatatcatcataacaaaccttataaaaaatctgcaaga
atagtaggagacgttatgggtaaatatcaccctcatggtgactcagctatctatgagtcg
atggttcgtatggctcaggatttcactatgagattacctttgattgatggtcaaggtaac
tatggttcaatggatggagatcctgctgctgctatgcgttatacagaagcccgtcttgat
aaagtatcttcttttatgcttgaagagttagaatatgacaccgttcaactaagaccgaac
tatgatgaaacattaacagagcctaaagttttaccttctcgatttcctaatatttttgtc
aatggcgcaagtggtattgctgtcggtatggctacaaatatcccacctcataatttaggt
gaaataattgatgcaacattgctcctcgtcgatgaacctgatagcacctcaaagcagcta
cataaaattgttaaaggtcctgattttccgactggtggaattatttcaggaaccgctgga
ctcaattcaatgtatgaaactggcaggggaagcgtaacagttctttctaaactgcatgaa
gaaaagattaaaactagaaatgcgattgttattactgaaattccataccttcaaaataaa
tctaagcttttagaaagaattgcagatgtggttaacaataaaaccattgaaggaataaat
gatattagagatgaatccaacaaagagggtgttcgtattgtcattgagctgaagtcttca
gctgtccctgaaattattaaaaatcaattatttcaatatacgccattaaaaacttctttt
agcagtaatatgcttgccttaaaggagacaaaaccattaaccctcaatttaagagatggt
ctttcacattttattgattttagaaaagacgtaatcactaaaagaactgtctataaatta
aacaaagcaagagaaaaagcgaatatccttataggtctttctatagctgtaaataatatt
gatgcggtaattgatttaattaaaaaatcaaaaactcctgcagaggcaaaacaaaaatta
ttatctacaaagtgggctgcgaaatcaaatattactcaatacataaaattaattaaccct
tcatttaaatcttcatcttctaaaatttcattagatgaagaacaagcaaaggctattctt
gaattaagattacaaaagttaactgctcttgagagagatgatttatttaataatttaaaa
tctttagttgacgatattaatagctatttaaaaattctaaattcagataagcaattatta
aaagttttaaaagatgaattaaatgaaattaaagacaattttgcaacacctcgtaaaact
gaaattcaaaaacacgacattgaagaagtagataccgaagatttgatagtagaagaagat
gttgtgattacagtttctcatcaaggatatattaaacgagtgcttaaatcctcctataaa
gttcaaaaaagaggaggtaaggggaaaaatgcgatgactacccgtgatgaggacttccta
gaacaagtttttgctgctactaccagagatacaattttattttttacttctgtaggtaaa
gtttattcaatgaaagcttatgaactacctgcgggaaccccaacttctagaggtaaagca
attgtcaatttaattccaatatcaaaaaatgagaaaatttcttctattctaactttacca
aaagatattggtgattttgaaaattacaatttagttttcgctacaagtttaggtaatatt
agaaaaaataaattaaaagatgttgcgatgagcggtacccgcaaattagcccgtactggt
aaaacagcaattaaactcaaaacaggagatcgtttaattggtgtaatttctgttattgaa
aatgatgatgttcaattagcaactacaaatggtaaatccataagatttgctacaaaagat
ttaagagaattttctggtttgggttcggcaggcgttagaggaattaaattagcaaaggat
gataaagttgtttctatttgtagtcttgttcataataaaatttctatcgatgtaagagag
tcttatttaaaagcaaaaaatgaggccaaaaaagatgcatcaaaaatgaataaaaaattc
caagaattagctgaaagtgaagaatatctcttgtctattacagaaaatggatatggtaaa
ttaagttccgcttatgagtataggataaccaatagaggtggatcaggtgtgactaacatt
actattactccaaaaaatggaagagttgttcaatctttaaaagtgaatttagatgataat
atagctttaatatcagactcaggaaaattattacgatgtaatgttggtgaaaacattcgt
gtagttggtagagtctcacaaggagtttctgtttttaaagtagatagtaaagaaaaaata
gtttctgtagctagattagaggattaa
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