Alpha proteobacterium HIMB59: HIMB59_00011340
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Entry
HIMB59_00011340 CDS
T02249
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
apc
Alpha proteobacterium HIMB59
Pathway
apc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
apc00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
HIMB59_00011340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
apc02000
]
HIMB59_00011340
Transporters [BR:
apc02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
HIMB59_00011340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Motif
Other DBs
NCBI-ProteinID:
AFS49317
UniProt:
J9Z1I8
LinkDB
All DBs
Position
1033693..1034868
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AA seq
391 aa
AA seq
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MMKILSILLSFALSYIPLAANAAPLQSIGEPEGELNVVAWAGYLERGATVEAFDWVTGYE
DNTGCKVNIKTAGTSDEMVALMNEGGFDIVTASGDASLRLIAGGTVQEINTDLIPSWNTI
DPRLQDAEWHTVDGKHYGTPYMWGSNVLMYNTNAFSEAPTSWNVVFEEQTLGDGASNKGR
VQAFDGPIHIADAAMYLMYHQPELGIKDPYELTDAQYQASLDLLRQQRELVGRYWHDAFM
QIDDFTNEGFVASGSWPFQVNLLVGAEQPIASVIPQEGATGWADTTMVHADAANVNCAYL
WMEHQLSSNLQSDLGVWFGAVPSVPSKCGTGLMDPAAGIYPEGADACKINGIDNFDKIYF
WKTPVSKCETQDSCVPYYKWVTDYIAVLGGR
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaatattatcaatattattatctttcgctttatcttatatcccattggcagct
aatgcagctccacttcaatccataggtgaaccagagggtgagcttaatgttgttgcttgg
gcaggatatcttgaaagaggagcaactgtagaggcttttgactgggtaaccggttacgaa
gacaatactggttgtaaagtaaatattaaaactgcgggtacttctgatgaaatggtagca
cttatgaatgaaggtggttttgatattgtaacagcttctggtgatgcaagtttaagacta
atagctggtggaacagtgcaagagattaatactgatttaattccaagctggaataccatt
gacccaagattgcaagatgctgaatggcatactgttgacggtaagcactatggtacacct
tatatgtggggttctaatgttttaatgtacaataccaatgcatttagtgaggctccaaca
agttggaatgtagtatttgaagagcaaacacttggagatggagctagtaacaaaggtagg
gttcaagcttttgatggtcctattcatatagctgatgctgctatgtacttaatgtatcat
caacctgaattaggtattaaagacccatatgaactaacagatgctcaataccaggcttct
cttgatcttttaagacaacaaagagaattggtaggaagatattggcatgatgcatttatg
caaattgatgactttaccaacgaaggttttgttgcttcaggctcatggcctttccaagtt
aacttgctagtgggtgctgagcaaccaattgctagtgttattcctcaagagggagctaca
ggttgggctgatacaaccatggttcatgctgatgcagctaatgtaaactgtgcatattta
tggatggaacatcaattaagttccaatctacaaagtgatttaggtgtttggtttggagct
gttccttcagtaccatcaaaatgtggtacaggattaatggatcctgcagcggggatttat
cctgagggtgcagatgcttgtaaaataaatggtatcgataacttcgataaaatttatttc
tggaaaacacctgtatccaaatgtgaaactcaagatagttgtgtaccttattataagtgg
gtaacagactacattgctgttctaggtggtagataa
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