Alpha proteobacterium HIMB59: HIMB59_00011480
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Entry
HIMB59_00011480 CDS
T02249
Name
(GenBank) helicase family protein,DEAD/DEAH box helicase
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
apc
Alpha proteobacterium HIMB59
Pathway
apc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HIMB59_00011480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apc03400
]
HIMB59_00011480
Enzymes [BR:
apc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HIMB59_00011480
DNA repair and recombination proteins [BR:
apc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HIMB59_00011480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecG_wedge
ResIII
RecG_dom3_C
Cas3-like_C_2
DEXQc_Suv3
SLFN-g3_helicase
AAA_30
IstB_IS21
TraI_hel_assoc_N
SecA_DEAD
nSTAND3
DUF6154
DUF7118
TsaE
IMS_HHH
Motif
Other DBs
NCBI-ProteinID:
AFS49331
UniProt:
J9Z2J2
LinkDB
All DBs
Position
complement(1044877..1046946)
Genome browser
AA seq
689 aa
AA seq
DB search
MNENNFKFLYQNVDKLKGIGPKKASYLRNLGINSVIDAFYILPSRVIDRTQDIDFRKLEK
GQIITTSLKVKKHHYPFNPKLPYVIECSKGKLVINLIYFSIKGNFLRNKFPENKEFIVSG
KVSFYKGNIGIAHPDYIEEIENEEKLRSFENIYPLTRGIHLKDLKKIFDFGKTYIGKYEE
WISESILNKFNFHSFYESILKLHFPENNKDVEKKELFRKRLAADELISNYFAIRYLKEKT
KKKDDSLDLDFSSQKQLLVKLPFKLTEKQKTIIKEINSLNNSHYRETILLQGDVGSGKTI
VSLLTAVPFIIKGYQVAYMAPTEILANQIYENLKNLIQLNEINAVLLTGSTKNKDVIYQN
IKDKKYNFIVGTHAIFQENLTFNQLKYVIIDEQHRFGVKQRLILGEKGINTNILLMSATP
IPRTLALAQYGEIEQVVLNERPAFQKPIITKVSNTEKIKDLIIYLRKSITDKNQIYWICP
LVEESENQSYKDVESRFQSLQKVFGSKVGLLHGKMKAIDKENIINEFKSGKISILVATTV
IEVGIDNKNANTVVIENSEKFGLSQLHQLRGRVGRGNEQGYCFAIYGENITDTSKERLKV
FKNNLDGFQLAEKDLEIRGTGDVLGYRQSGDSLFKFVDTMNDQELIRECFDYVKEVISNK
KFEDKEYQQKIYQLLLFFKQQEAIKLLFS
NT seq
2070 nt
NT seq
+upstream
nt +downstream
nt
atgaatgaaaataattttaagttcttatatcaaaatgtagataaacttaaaggcataggg
cctaaaaaagccagttatctcagaaatttaggaattaattccgttatagatgctttttat
atcttgccctcaagagtaatcgatcgaacacaagacatagattttagaaaattagaaaaa
ggtcaaataatcacaacttctttaaaagtaaaaaaacatcactacccttttaatcccaaa
ttgccttatgttattgagtgtagtaaaggaaaattagtcataaatttgatatatttctct
attaaagggaactttttaagaaataagtttcctgaaaacaaagaattcatagttagtggg
aaagtttcattttataaaggcaatattggtattgcccatccagattatatagaggaaata
gaaaatgaggaaaaactcagaagttttgaaaacatatatccactaacaaggggaatacat
ctaaaagacttaaaaaaaatttttgactttggaaaaacttacattgggaaatatgaagaa
tggatatcagagtcaattcttaataagttcaattttcatagtttctatgagtcaatttta
aaattacattttcctgaaaataacaaagatgtagaaaaaaaagaactatttagaaaaaga
cttgctgctgatgagttgatttccaactatttcgccattcgctatttaaaagaaaaaact
aaaaaaaaggatgatagtttagatttagatttttcatctcaaaaacagttactcgtcaaa
ctaccctttaaactgacggaaaaacaaaaaacaattatcaaagaaataaattcattaaat
aatagtcattatcgtgaaacaatcttattacaaggagatgttggatctggaaaaacaatt
gtatccttattaacagctgttccctttataattaaaggatatcaagttgcctacatggct
ccaactgaaatattggcaaatcaaatatatgaaaatcttaaaaatcttattcaactaaat
gaaattaatgccgttctattaacaggcagtaccaaaaacaaagatgttatttatcaaaat
attaaagataaaaaatataattttattgttggaactcatgctatctttcaagaaaactta
acgtttaatcaattaaaatatgtcatcattgatgaacaacatcgttttggtgtaaaacaa
agattaattttaggagaaaaaggcattaacactaatattctgttaatgtcggctactcct
attccaagaacattagcgctagctcaatatggagaaatcgaacaagtagttttaaatgaa
agaccagcttttcaaaaacctattattacaaaagtttcaaataccgaaaaaattaaagat
cttattatttacttaagaaaatccataacagataaaaatcaaatatattggatatgccct
cttgtagaagagtccgaaaatcaaagttataaagatgtagagtctagatttcagtctttg
caaaaagtatttggttcgaaagttggtttgcttcatggaaaaatgaaagctattgataaa
gaaaacattatcaatgaatttaaatctggaaaaataagtattttggttgccacaacagtc
atagaagttggaatagataataaaaatgcaaatacagttgtcatagagaactcagaaaaa
tttggattatcacaacttcatcaattaagaggaagagtcggaagaggaaacgagcaaggt
tattgttttgctatttatggcgaaaatattaccgatacatctaaagagcgtcttaaagta
tttaaaaataatttagatggctttcaattagcagaaaaagatttagagataagaggaact
ggagacgtgcttggttatcgtcaaagtggtgactctttatttaagtttgtggatactatg
aatgatcaagaattgattagagaatgttttgattatgtaaaagaagttatatctaataag
aaatttgaagataaagaatatcaacaaaaaatttatcaattacttttattttttaaacaa
caagaagcgataaaattactttttagttaa
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