Alpha proteobacterium HIMB59: HIMB59_00012860
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Entry
HIMB59_00012860 CDS
T02249
Name
(GenBank) DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
apc
Alpha proteobacterium HIMB59
Brite
KEGG Orthology (KO) [BR:
apc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apc03032
]
HIMB59_00012860
03036 Chromosome and associated proteins [BR:
apc03036
]
HIMB59_00012860
03400 DNA repair and recombination proteins [BR:
apc03400
]
HIMB59_00012860
DNA replication proteins [BR:
apc03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
HIMB59_00012860
Chromosome and associated proteins [BR:
apc03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
HIMB59_00012860
DNA repair and recombination proteins [BR:
apc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
HIMB59_00012860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_1
Peptidase_M35
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AFS49464
UniProt:
J9Z0L6
LinkDB
All DBs
Position
complement(1173449..1173730)
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AA seq
93 aa
AA seq
DB search
MNKNELIAEYSSKNNVGKSDATKAVESLFDIITNTLKAGGDVKIAGFGTFKVANTKAKTG
RNPRTGESIEIPASKKPKFLAGKQLKELIKSTV
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaatgaactcattgctgaatacagttcaaaaaataacgtaggtaaatcagat
gcaactaaggctgtagaaagtttatttgatattatcacaaatactttaaaggctggtggt
gacgtgaagattgctggttttggtacttttaaggtagctaacactaaagcaaaaacaggt
agaaacccacgtaccggagagtcaattgaaattcctgcatcaaaaaagccaaaatttctt
gctggaaaacagctcaaagaactaataaagtccacagtctaa
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