Alpha proteobacterium HIMB59: HIMB59_00014290
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Entry
HIMB59_00014290 CDS
T02249
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
apc
Alpha proteobacterium HIMB59
Brite
KEGG Orthology (KO) [BR:
apc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
apc03032
]
HIMB59_00014290
03400 DNA repair and recombination proteins [BR:
apc03400
]
HIMB59_00014290
Enzymes [BR:
apc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HIMB59_00014290
DNA replication proteins [BR:
apc03032
]
Prokaryotic type
DNA Topoisomerases
HIMB59_00014290
DNA repair and recombination proteins [BR:
apc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HIMB59_00014290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
Toprim_2
Motif
Other DBs
NCBI-ProteinID:
AFS49602
UniProt:
J9Z2K6
LinkDB
All DBs
Position
1308185..1310698
Genome browser
AA seq
837 aa
AA seq
DB search
MNLLVVESPAKAKTINKYLGSDFEVIATVGHFRDLAKKDGVQVSEDQNDITLNWETTSAG
LKMIDTIEKKASGYEQIYLATDPDREGEAITWHLIKSLEKKVDNNKFKRITFNEITKNAV
INSFEKARNVDEHLVSAYLARRSLDYLAGYNLSPVLWRKMPGSRSAGRVQSVAVRLIYER
EIEIEQFEPEKFYKIGIQGKIKSADLETAIASFEGEKVDKLFFRDENLAKKAEQIILSSK
FNISKIDERNVSRKPKAPFNTSTLQQTANSQLNFSASQTMTVAQGLYMGVDIQKETVALI
TYMRTDSISLSKESIEIIRAKIENDFGPKYLPKDPIEYKTKKKNAQEAHEAIRPTDVNIH
PDSIKDHVTEDQFKLYDLIWRRTISSQMSNAETNLNALTITNPEESIQLKATLGKLVFDG
FKKLYNLQEEGEEQSFSVLDNLNVGDEYLPNTVEIDESFTSPPSRYTDASLVKKLEELDI
GRPSTYASIIQVIQSRGYVIKNGKSFYLNDRGRVVNVFLVNYFKKFLEYKFTADMEQQLD
DVAANKAEWKELVLNFWKDFQKFIDEVMSKPNREVIDVINDELSPVIFNKKEDGMITKCT
SWTNCTHDGSGDLGIKVGKIGGFIGCSKYPDCKYTISIGNFIKEVNPNNSDDDIVTFPRI
LGIDADTNKEISIQLGPYGYYLQLGRETDDEKPKRVTLPKNYDPMNLGMNIASQLIKLPI
TLGHYPETEEPVIANIGAYGPYVKYQDIFASLGRKFDILEIGLEQAVELINIKKNKPTNK
VREIGVLKRKRQKANLYKGKSGKYYFKIGIMNYKIPAEYDGENLTIEDVEKILKTNR
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgaacttactagttgttgaatctccggcaaaagcaaaaactattaataagtacctagga
agtgactttgaagtaatagccactgttggacactttagagatttagcaaaaaaagatggg
gttcaagtcagtgaggatcaaaatgacatcactttaaactgggaaacaacttctgctggt
ttaaaaatgatcgatactattgaaaaaaaggcttcaggatatgaacagatttatttagca
acagaccctgatcgtgagggagaagctattacatggcatttaattaaatccttagaaaaa
aaagtagataacaacaagttcaagagaattacttttaatgaaattaccaaaaatgcggtt
ataaatagttttgaaaaagctagaaatgttgatgagcatttagtatctgcttatctagct
agacgctcattagattacttagcgggttataacctttcaccagttctatggagaaaaatg
cctgggagtcgatctgcaggaagagttcaatcggtggccgttagattaatttatgagcga
gaaattgaaattgaacaatttgaacctgaaaaattttataaaattggtatacagggaaag
atcaaatcagccgatctagaaacagctatcgcctcttttgagggggaaaaagtagataaa
ctattttttagagatgaaaatttagccaaaaaagctgagcaaatcattttatcgagtaaa
ttcaatatttctaaaattgacgagagaaatgtttcccgtaaacctaaggctccttttaat
acttcaacacttcaacaaactgcaaatagccaactaaattttagcgctagtcaaactatg
acagttgctcaaggactatatatgggggttgatattcaaaaagaaactgttgctttaatt
acttatatgagaacagatagcatatcgctctctaaagagtctattgaaataataagggct
aagatagaaaatgattttggtcctaaatacttacctaaagatccaatagagtacaaaact
aaaaagaaaaatgcacaagaggcccacgaagcaattagaccaactgatgttaatattcat
cctgactccattaaagatcatgtaaccgaagatcaatttaaattatatgatttaatttgg
agaagaactatttcttctcaaatgtccaatgcagaaactaatttaaatgctctaactatt
acaaatcctgaagaaagcattcaattaaaagcaacattaggaaagcttgtttttgatgga
tttaagaaactttacaatttacaagaagaaggtgaagaacaatcattttctgttttagat
aacttaaatgttggtgatgaatatttaccaaatactgtagaaattgatgaatcgtttacc
tctcctccctctcgatatacagatgcaagtttagtaaaaaaattagaggagttggatata
ggtcgcccttctacctacgcttcaattattcaagtcatccaatcccgaggctatgtaatc
aaaaatggtaaatccttttatctaaatgacagaggcagagttgtgaatgtatttttggtc
aattattttaaaaagttcttggagtataagtttactgctgatatggaacagcaattagat
gatgttgctgcaaataaggcagaatggaaagaattagttttaaacttttggaaagatttt
caaaaatttatcgatgaggtgatgagcaaacctaatagagaagttattgacgtaattaac
gatgaactctctccggttatctttaataaaaaagaagatggtatgattacgaaatgtact
tcatggacaaattgtactcatgatggtagcggtgacttaggtattaaagtcggaaaaatt
ggaggatttattgggtgttctaaatatccagattgtaaatacactatttctattggtaat
tttataaaagaggtaaaccctaataacagtgatgatgatatcgtcacttttccaagaatt
ttgggaattgatgcagataccaataaagaaatttcaattcaattaggcccctatggttac
taccttcaactcggaagagaaactgatgatgaaaagcccaaaagagttacattacctaaa
aattacgatccaatgaacttaggaatgaacatagctagccaactaattaagctaccaatt
acattaggtcattaccccgaaacagaagaacctgttatagcaaatattggagcttatgga
ccttatgtgaaataccaagatatctttgcctcacttggaagaaagtttgatattttagaa
attggattagaacaagctgttgaattaatcaatatcaagaaaaataaacctactaataaa
gttagggaaataggtgttttaaaaagaaaacggcaaaaagcaaatttgtataaaggaaag
tctgggaaatattattttaaaattggaattatgaattataaaatcccagcagagtatgat
ggtgaaaacctgacaatagaagatgtcgaaaaaattctaaaaactaaccgttaa
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