Anaplasma phagocytophilum Dog2: YYY_05450
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Entry
YYY_05450 CDS
T02752
Name
(GenBank) recombination protein RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
apd
Anaplasma phagocytophilum Dog2
Pathway
apd03410
Base excision repair
apd03430
Mismatch repair
apd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YYY_05450
03430 Mismatch repair
YYY_05450
03440 Homologous recombination
YYY_05450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apd03400
]
YYY_05450
DNA repair and recombination proteins [BR:
apd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
YYY_05450
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
YYY_05450
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
YYY_05450
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AGR81558
LinkDB
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Position
complement(1232052..1233809)
Genome browser
AA seq
585 aa
AA seq
DB search
MLQSSAEEAVLCTGVSGAVWKVHNATYRDVLTIKQKFGLSEIVAHVLAIKRIPLDDIRDF
LFPTLKLLLPDPFHLLDMGKAVDRILKAIYEKERIVIFGDYDVDGATSSAMLKRYFKSIG
ATAEVYIPDRLKEGYGPNPEALIKLRKKGCSLCITVDCGTVAHEPISVARAAGLDVIVVD
HHIGSPTLPDATAIINPNRLDETSTYTYLSGVGTSFMLLIALNKTLRQAGYFQQENEPNL
MNYLDLVALGTVCDVMPMLKLNRAFVKQGLKVMSERGNMGLRTLADAIGIEEKPSVYHLG
FCIGPHINAGGRIGNSSLGARLLSSNDAIECNKIVTMLLDLNNERKEIENRSLAEALAQA
ELLVDEGKNIIMVTGNWHVGVIGIIAGRIKERFFLPTIVISLDGDMGKASARSVAGIDIG
AAVLSAKFEKLIPEGGGHEMAAGFSVHRSQIEPLYKFFLERFKDVNIQKALHASGILSTA
GISSALCRELQLLEPFGPGNPEPKFVLRNVRIKNPAIIGESHIKCLIDDGSGASVRGMCF
KCVGTELALGLLQGGIAVHLLGKVSMNQWRGNEYVQFIIDDLAFA
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atgctacaaagctcagcagaagaagcagtcttatgtacgggagtaagtggagccgtatgg
aaggtgcataacgctacatatagggatgtactcacgataaagcagaagttcggactttct
gaaatcgtagcgcatgtcttagctataaaacgcatacctctagatgatattagagatttc
ttgtttcccactttaaagctgcttctgccggatcccttccatctgttggatatgggaaag
gctgttgataggatattaaaagccatttatgagaaagaaagaatagtaatttttggtgac
tatgatgttgatggggcgacctcttcggcaatgctcaagaggtatttcaaaagcatagga
gctactgcggaagtttacattcccgatcgcttaaaagaggggtatggaccaaatccagaa
gctctaataaaacttagaaagaagggatgtagtttatgtatcacagtagattgcggtact
gttgcgcatgaaccaatatcagttgctagggctgcgggattagatgtaattgttgtggac
caccacatagggtctcccacattaccggatgcgacggccattataaatcccaatcgcctt
gatgagacgtcgacttacacgtatttgtcgggtgtagggacttcctttatgttgttgatt
gcattgaataagactctgagacaagcagggtattttcagcaagaaaatgagccaaattta
atgaattatttggacttggtagctcttggtactgtttgtgatgtcatgccaatgctcaag
ttaaacagggcatttgtaaaacagggactaaaagtgatgtcagaacgaggaaatatgggg
cttagaactcttgccgatgcgataggtattgaagaaaagcctagtgtttatcatctcggt
ttttgcataggtccccacatcaatgcaggaggcagaatcgggaattcaagcttaggggcg
cggcttttatcaagcaatgatgctattgagtgtaataaaattgtcacgatgttgcttgat
ttgaataatgagagaaaagaaatagagaatagaagccttgctgaagcactggcgcaggca
gaactccttgttgatgaaggtaagaatatcatcatggtcacaggaaattggcatgttggg
gttataggaatcattgctggtcgcataaaagaacgttttttcttaccaacaattgtaatt
tctctagatggggacatggggaaagctagcgcgcgttctgtagcgggtattgacataggg
gctgctgttctatccgctaagtttgaaaaactaattcctgaaggtggtggacatgaaatg
gctgcaggattttccgtgcatagaagccagatcgagccactatataagttctttttagag
agatttaaagatgtaaatatacaaaaggctttacatgcgagtggtattttatcaactgcg
ggcatttcttccgcgttgtgcagagaattgcaattattagaaccgttcgggcctggaaac
ccggaaccgaaatttgtactcagaaatgttcgtataaaaaatcccgctattataggagaa
agtcacataaaatgcttaattgacgacggcagcggtgcttctgtgcggggaatgtgcttt
aaatgtgtaggaacagaactagctctagggttactacagggaggcatagctgtacattta
cttggcaaagttagcatgaatcaatggcggggtaatgaatatgtacagtttataatagat
gaccttgcgtttgcgtaa
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