Aeropyrum pernix: APE_0107
Help
Entry
APE_0107 CDS
T00023
Symbol
herA
Name
(GenBank) bipolar DNA helicase
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
ape
Aeropyrum pernix
Brite
KEGG Orthology (KO) [BR:
ape00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ape03400
]
APE_0107 (herA)
DNA repair and recombination proteins [BR:
ape03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
APE_0107 (herA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF87
HAS-barrel
HerA_C
Motif
Other DBs
NCBI-ProteinID:
BAA79017
UniProt:
Q9YFZ4
LinkDB
All DBs
Position
complement(77777..79417)
Genome browser
AA seq
546 aa
AA seq
DB search
MSSESSICGGDEIGVIIGESSYSYSTILLERDSLGKVIVGSHVVSTLNGRCVLGIVESIR
SGLPLLGDEVRDLDSVKRMLESDVASVVESTRYHVARVRWVSYLETLLERGEQSAPKIPP
QPGSTVRLARSEVLGRVFSPEGDSWVRIGSLLGSGVEYRIDVNKLTRHLAILAVTGGGKS
NTVCVITRRLVGQLGVTTVIFDRHGEYGTLGLGAGEARLLRPARVNPASLSYWELLYMAG
FEPQATAQKRVLRWLWGELARRYRQGKIGAADLIPKAVEVLEKASRSSKSSKQDPGSLAR
AFSEVLGDEPSNAPAVRQDQILGVLDKLNDLQDLYGSALDPNIPIDLTRIIEPGKATIMD
LSMMEDNVADAVASHYLRRLLQARVNSRGEGLSGLEVYPVPVITIIEEAHVLIPRDEPTL
TKRWAARIAREGRKFGVGLVIVSQRPKKLDVDVLSQTNNKIILKMVEPQDISYVRAASEE
LSEDLASLLPSLNTGEALIMGSMARMPAVVKIDKCEAPTGGRDINIVEETRRWLSREEDS
LEELAL
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
gtgtcctcagaatctagcatatgtggtggggatgagattggagtcattattggagagagt
agctacagctacagcaccatcctcctggagagggacagccttggcaaggtgatagtcggc
tctcacgtggtttcgacgctaaacgggagatgcgtcctcggtatagtggagtccatacgc
tcgggcctaccactcctcggcgacgaggttagggatctggattccgttaagaggatgttg
gagtctgatgttgctagtgtagtagagtctacacgctaccatgtagcccgggttaggtgg
gtctcatacctcgaaaccctgttggagcgtggggagcagagtgcaccaaagatacctcca
cagccggggtcgactgtgaggcttgcgaggagcgaggtcctgggaagggttttctcgccg
gagggagacagctgggtaaggataggctctcttcttggaagcggtgtcgagtataggatt
gatgttaacaagcttaccaggcatctcgccattcttgccgtgactggcgggggcaagagc
aacaccgtctgcgtgataaccaggaggcttgtcgggcagttaggggtgacaacagtcatc
ttcgaccgtcatggagaatacggtactctaggcctaggagccggtgaagcaaggctcctg
agacctgccagggtgaacccggcaagcctctcttactgggagctcctctacatggcgggc
ttcgagccgcaggcaacggctcagaagagggttctgaggtggctttggggggagctggct
aggcggtatcgccaggggaagataggggcggcggacctcatacccaaggcagttgaggtc
ctcgagaaagcctcccgctcaagcaagtcgtctaagcaagaccccggctctctcgcccgc
gccttcagcgaggttctaggcgatgaaccctccaacgcacccgccgtgaggcaggaccag
atactgggtgttctagataagctgaacgaccttcaggacctctacggtagtgctctggac
ccgaacatacccatcgatctgactcggattatagagccgggtaaggcgaccatcatggat
ctcagtatgatggaggataacgttgcggacgcggtggctagccactacctccgcaggctt
ctccaggctagggttaacagcaggggcgagggtctctccggcttggaggtgtatcctgtg
cctgtgattaccatcatagaggaggctcatgtgctaatacctagggacgagcctaccctt
accaagagatgggctgcgaggatagctagggaggggagaaagtttggcgtgggtcttgta
atagtaagtcagaggcctaagaagcttgacgttgatgtcttgagccagactaacaataag
ataatattaaagatggttgagccgcaggacataagctacgttagggctgccagcgaagag
cttagcgaggacctagcaagccttctcccaagcctaaacactggtgaagcgcttataatg
ggtagcatggctagaatgccggcggtggttaagatagataagtgcgaagcacccacaggt
gggagagatataaacatagttgaagaaacgaggagatggctctcaagagaggaggacagc
ctagaggagctggccttatga
DBGET
integrated database retrieval system
