Aeropyrum pernix: APE_0110
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Entry
APE_0110 CDS
T00023
Name
(GenBank) DNA double-strand break repair rad50 ATPase
Organism
ape
Aeropyrum pernix
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_23
AAA_15
AAA_13
AAA_21
Rad50_zn_hook
SbcC_Walker_B
AAA_29
ABC_tran
Relaxase_C
AAA_27
NPV_P10
MscS_porin
BRE1
ABC_ATPase
MukB
FtsK_SpoIIIE
AAA_22
SlyX
RsgA_GTPase
DUF1664
AAA_16
MMR_HSR1
PhageMin_Tail
DUF16
Motif
Other DBs
NCBI-ProteinID:
BAA79020
UniProt:
Q9YFZ1
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Position
complement(80633..83392)
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AA seq
919 aa
AA seq
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MYVLKRLELRNIMSHFNTSIDFREGFTAIVGRNGAGKSTILEAILFSITPHQAPRRSSMI
SENSSRGEIYLALQSSEGRLLELRNKLIRRGGGTNTEAAIITLEGRRIASKPTGYKEEIH
KILGLRGLPNPASYIEKAIIISQGGLQTLAEILSEPKELRDLLDAALGYALLKQAISNIG
DVVLGVSPDGSPVKLGSKSITRLQSGYMTLRNEVLGVDREIREASKRLEELEREREELER
RARDLESEAKALQSEIGKLETMEEMLVNVTSMIRSERSKLDTINTRLRYAESKISSIDDL
EKRRAELRAKASLAHEVAELARLQSRLDKLGRDLEMIRDAVEKLEVSRRLKEIESARREA
ENRLLEARSSIKEEQRRYTLLDYRVTRGRSIVTNIRRVLSECRSKDLCGSEKPESVLERL
DAVINDLESKARALDQEASALEAEARRLVQALSMLEESGGSARCPVCGAELPPGRAEAIA
RHYRHEAERLRKAAKEKAAEAEKARAEASRLQDKRRRIELLLSRLNQLEEGLRELGFQTP
EDLAKAEQKLRMLRERLEELRKLENSLEEKVRNLSREEVALREAKTRALEVLQRLGIKEE
EAREKLKTLSSESKKLERMLVSKAEDLATRLGITAYRSLDDLLEKAREALEGVDKELSAI
ERRLEEARRLKEEAAKLKWEAEQVMKRLEELEAEEKKLRKEVSRKSEIEARLKEVQNTLA
ELDDRISRIDREMGELQTRIREMKSRKASGEEALKLYLPAAASRRIMEEIGEIAYRRLLA
VLEDEMNDILSRFNLDVAGVEIREKAAREIEVKAIGGNGAYRPLEAVSGGERTVLALSFV
LALNKAVGGKLGFLALDEPTANLDEDRRRSLVEVLRGISVEGLVRQLVVVTHHEDVRDYA
DTICLVTRTQQGSRVECTY
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
gtgtatgtcctgaagaggctcgagctgagaaacataatgagccacttcaacaccagtata
gatttccgcgaaggcttcacagctatcgtaggccgcaacggcgcggggaagagcactata
ctcgaggcgatactgttcagcataaccccccatcaagcgcctaggaggtcgagcatgata
agcgaaaactctagtcgaggagaaatataccttgccctccagtccagcgagggccggcta
ctcgagttgaggaacaagctgatcaggagaggggggggtacgaatacggaagcggccatc
atcaccctggaggggcggaggatcgccagcaagcccacggggtacaaagaggagatccat
aagatactcgggctcagggggctgcccaaccccgcatcgtacatagagaaggcgataata
atctcccaaggaggactccaaaccctcgcagaaatcctgtcagaacctaaggagctgaga
gacctccttgacgccgccctaggctatgccctgctcaagcaggccatatcaaacatcggt
gatgtggttctaggcgtttccccggacgggagtcctgtcaagctcggctccaagtctata
accaggcttcagtcagggtacatgacgctgaggaacgaggtcctgggagttgatagggag
ataagggaggcttccaagaggctggaagagcttgagagggagagggaggagcttgagagg
cgtgccagggatctcgagtcagaagccaaggccttacagagcgagatagggaaactagag
actatggaggagatgcttgtcaacgttaccagcatgattaggagcgagaggtcgaagctg
gataccatcaacacacgcctaagatatgcggaatcaaagatctcatccatcgatgacctc
gagaagcggagggcggaactcagggcgaaagcttcgctggctcacgaggtcgccgagctt
gcaagacttcagagccgattggacaagctggggagagacttggaaatgattagagatgct
gtagaaaagctggaagtatcgcgcaggctcaaggagattgagtctgcgaggagggaggct
gagaacaggcttctcgaggctagatccagcattaaagaggagcagaggcgatacactctc
ctcgactatcgtgtcaccaggggaaggagcatagtcacaaacattaggcgagtactatcc
gaatgccgctctaaagacctatgcggcagcgaaaaaccggagtctgtattggaaaggcta
gacgccgtgataaacgatctagaatcaaaagcccgggctctagaccaggaagcatcagcc
ctggaagcagaagccaggaggttagtccaggccttatcaatgctagaggagagtggaggg
agcgcgagatgcccggtatgcggagccgagcttccccccgggagggcagaggctatagcc
agacactataggcacgaggcggaaagattaaggaaggctgccaaggagaaggctgctgag
gctgagaaggccagggctgaggcctcccgcctacaggacaagcggaggaggatagagcta
ctattatccaggctgaaccagcttgaggaaggcctgcgcgagctagggttccaaactccc
gaggacctcgcgaaggccgagcagaagctaagaatgcttagagagaggctggaggagctt
agaaagcttgagaacagtctcgaggagaaggttaggaatctatcccgcgaggaagttgca
ctgcgagaggctaagacaagagccctagaggttttacagcgtctaggcataaaggaggag
gaggctagggagaagcttaagaccttgagcagcgagtcgaaaaagctcgagaggatgctc
gtctcgaaagcggaggacctggccacgaggcttggaatcacagcgtacaggagcctggac
gacctgctcgaaaaagcaagagaggctctagaaggtgttgacaaggagctatcagccata
gagaggaggcttgaggaggctcgccggctgaaagaggaggctgcgaagctaaaatgggag
gctgagcaggttatgaagaggcttgaggagctggaggctgaggagaagaagctgaggaag
gaggtttctaggaagagtgagattgaggctaggctgaaggaggttcagaacactctcgcg
gagttggacgacaggatcagcaggattgacagggagatgggagagctacagacgagaatt
agagagatgaagtctaggaaggccagtggcgaggaagcactaaagctctacctacccgcc
gctgcttccaggaggattatggaggagataggggagattgcctataggaggctcttagca
gtgctggaggacgagatgaacgatatactctccaggttcaacctagacgtggctggcgtg
gagattagggagaaggcggctagggagatagaggttaaggctatcggcggcaacggcgcc
tacaggccgcttgaggccgtcagcggtggggaaaggacggtcctggctctctcattcgta
ctagcactgaataaggctgtcggcggtaagctgggtttcttagctctcgacgagcccacc
gctaatctagacgaggataggaggaggagcctggtagaggtcctcagaggcatcagcgtc
gagggcctggtaaggcagctcgtggtggtgactcaccacgaagacgttagggattatgca
gacaccatctgccttgtaacccgaacccagcagggaagcagggttgaatgcacctactag
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