Aeropyrum pernix: APE_0685
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Entry
APE_0685 CDS
T00023
Name
(GenBank) hypothetical protein
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
ape
Aeropyrum pernix
Brite
KEGG Orthology (KO) [BR:
ape00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ape03016
]
APE_0685
Enzymes [BR:
ape01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
APE_0685
Transfer RNA biogenesis [BR:
ape03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
APE_0685
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SEN2-like_N
tRNA_int_endo
Motif
Other DBs
NCBI-ProteinID:
BAA79661
UniProt:
Q9YE85
Structure
PDB
PDBj
LinkDB
All DBs
Position
458574..459086
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AA seq
170 aa
AA seq
DB search
MGKGEGEVAGCKAAARLGVEGVFVEECFDGSYCRNLERIGYLRKGRLEPLEAAYQASRGM
LCMGETRGWAAAVEVIAGLGLSLDTALVYFDLRRKGRKPLVGVRRGTLVYEHGGRVYEVL
VLSEGYPLKIGSLVEWSRGASMDNHSPIVAIVDRTGLITYYEARAVRSIQ
NT seq
513 nt
NT seq
+upstream
nt +downstream
nt
gtggggaagggcgagggcgaggtagccgggtgcaaagccgcggcgaggctcggggttgag
ggtgtatttgttgaagaatgcttcgacggcagttactgcagaaacctggagaggattggc
tacctgaggaaagggaggctcgagcccctggaggcggcttaccaggcctcccggggcatg
ctgtgcatgggggagaccagaggatgggcggcggctgtcgaggtgatagccgggttaggc
ctgagcctggacacagctctagtctacttcgacctgaggaggaagggtaggaagcccttg
gtgggggtgaggaggggcaccctggtctacgagcacggcggccgcgtctacgaggtcctc
gttctcagcgagggctacccactgaagataggaagcctggtagagtggagcaggggggca
tcgatggacaaccactcgcccatagtagccatagtggataggactggcctgataacctac
tacgaggctagggctgtcaggagcatacaatag
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