Aeropyrum pernix: APE_1530.1
Help
Entry
APE_1530.1 CDS
T00023
Name
(GenBank) MiaB homolog
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
ape
Aeropyrum pernix
Brite
KEGG Orthology (KO) [BR:
ape00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ape03016
]
APE_1530.1
Enzymes [BR:
ape01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
APE_1530.1
Transfer RNA biogenesis [BR:
ape03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
APE_1530.1
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-ProteinID:
BAA80529
UniProt:
Q9YBR9
LinkDB
All DBs
Position
complement(966238..967590)
Genome browser
AA seq
450 aa
AA seq
DB search
MEAEIPGQAGRRAGKPSRTYYLEVYGCSLSEFDALIMASRLEEAGYRRVARPEDADVILV
NTCAVRLDTEQRIAERLEKLRLQLPDRKYVVAGCLVKARPGLVARLVPEASLLAPQAVER
VLDAVDALESGRRLVVLDGRRDTRSMPQLPITDAVVTVMIQEGCLGDCSFCITKVARRQV
RSYSPRVIVERVREAVEKGAREIRLTGTDVAVYGVDLPGKPNLADLVAAILEKVEGDYRI
RVGMMTPDQVEPYLDSLLDVYRDERVYKYFHLPVQSGDDEVLKIMKRNYTVSEYKAIHRR
IKSRFPDAMIATDIIVGHPGETWEAFWNTVRLVEELRFEKVHLAQYSLRPHTEAASMEQV
PDSVKKERSRILGKIVAEIGLEINGSYVGRRVRALVTERSWREGSMTGRLDNYTPIILPY
EERAMGRWVYAEVEEATFFDLRSSKFEPAP
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
gtggaagcagagatcccaggccaggcgggcagacgggctggcaagcccagccgcacgtac
tatctagaggtctacggatgctcgctctcagagttcgacgccctcataatggcgtccagg
ctagaggaagctggttataggcgggtggcgcggcctgaggatgccgatgtaattctagtt
aacacgtgcgcggtcaggcttgacactgagcagaggatagctgagaggctcgagaaactg
aggctccaactgcctgacaggaaatacgtggtggcgggctgtcttgtcaaggcgaggccc
ggcctggttgcgaggcttgtaccggaggccagccttctcgcaccccaggctgttgagagg
gttctcgatgctgtagacgccctcgagtctgggcggaggcttgtggttctcgacggcagg
agagacactaggtcaatgccccagctccctattactgatgctgtcgttacggtgatgatc
caggagggttgcctgggagactgcagcttctgcatcaccaaggtggccaggaggcaggtg
aggagctacagcccgagggtcatagtggagagggtcagggaggctgtcgagaagggggcc
agggagataaggctgacggggaccgatgttgcggtctacggtgtcgacctacccggaaag
cccaatctggcggacctggtggctgctatcctggagaaggttgagggggactataggata
agggtggggatgatgacgccagaccaggttgagccctatctggacagcctcctcgacgtc
tacagggatgaaagggtgtacaagtatttccacctccctgtgcaaagcggtgatgacgag
gtcctcaagattatgaagaggaactacacagtcagcgagtacaaggcaatccacaggagg
atcaagtccaggttccccgacgctatgatagcgaccgacattatcgtcggccacccaggc
gagacctgggaggcgttctggaacactgtaaggcttgttgaggagctgaggttcgaaaag
gtccaccttgcccagtacagcctgaggccccacaccgaggcggcgtccatggagcaggtt
cccgacagtgtcaagaaggagaggagcaggatactggggaagatagtcgcggagataggt
ttagagatcaacgggagttatgtggggcgaagggtgagagccctcgtcacagagcggtcc
tggagggaggggagcatgaccgggaggctagacaactacacacccataatcctaccctac
gaggagagggctatgggaaggtgggtctatgcggaagttgaggaggccacattcttcgac
ctgaggtcctcgaagttcgaaccggctccttaa
DBGET
integrated database retrieval system
