Aeropyrum pernix: APE_2023
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Entry
APE_2023 CDS
T00023
Symbol
csd
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
ape
Aeropyrum pernix
Pathway
ape00450
Selenocompound metabolism
ape01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
ape00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
APE_2023 (csd)
Enzymes [BR:
ape01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
APE_2023 (csd)
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
APE_2023 (csd)
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Aminotran_1_2
SelA
Motif
Other DBs
NCBI-ProteinID:
BAA81033
UniProt:
Q9YAB6
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All DBs
Position
complement(1275809..1277044)
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AA seq
411 aa
AA seq
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MPRFSCYEVRSEFPELERGIVYLDNAASTLKPRRVVEAMREFSYRSYANVHRGVHRLSME
ASKAYEDAHEVVARLVGGSWDEVVFTRNTTEAMQLAALTLAYNGLLRGGEVLVTAADHHS
TLLPWVRAARLGGGRARILPLDGRGVPRWDLLEDYITEDTRAVAVGHVSNVTGVVAPVED
IVKAAKKVGALVVLDSAQGVPHLPVDFRRMGVDMAAFSGHKMLGPTGIGVLWARRDLLEE
LEPPLGGGGTVSRVRLQGGSVEIEWEEPPWKFEAGTPPIIEAVGLAEAANMLMEIGMEHV
ARHEDELTSHTMKLLEPLYSEGLIRYVGPDKPGERHGIVSITTHLKSPDELGLLLDRRGI
AVRTGLHCAHILHDHVDASMGSVWASFYIYNCKEDAERLAEALEEILTTRR
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggtttagctgttacgaggttagatccgagtttcctgagcttgagaggggtatt
gtctatcttgacaatgctgccagcactttgaagccaaggcgtgttgtggaggctatgagg
gagttctcgtataggagctatgccaacgtccataggggtgtgcataggcttagcatggag
gctagtaaggcctatgaggatgcgcacgaggttgtcgccaggctggtcggggggagttgg
gacgaggtcgtgttcacccgcaatactacggaggcgatgcagctggccgcacttacccta
gcctacaacgggctcctaaggggcggcgaggtcctcgtgaccgcggctgaccaccactcc
actctactaccctgggtcagggcggccagactggggggtggtagggcgaggatactcccc
ctcgacggccggggggttcctaggtgggacctgctcgaggactatataaccgaggatacc
agggcggtggcagtaggccacgtatccaacgttacgggggtggtggcccctgtggaggat
atagttaaggctgcaaagaaggtgggcgccctggtcgtgctcgactcggcccagggggtg
ccacacctgccagtagacttcaggaggatgggggtcgatatggcggcgttcagcggccat
aagatgctggggcccacgggcattggtgtcctgtgggccaggagggaccttctcgaggag
ctcgagccacccctgggagggggagggactgtgtcgagggttagactgcaggggggctct
gtggagatagagtgggaggagccgccgtggaagttcgaggcaggaaccccgcctataata
gaggccgtcggcctggcggaggccgctaacatgctcatggagattggtatggagcatgtt
gcgaggcatgaggacgagctgacgagccacacgatgaagctgctggagcccctctacagt
gaaggcctgatacgctatgtgggccccgacaagccgggtgagaggcacggtatagtctct
ataaccacccacctgaaaagccccgacgagctaggcctcctcctcgacaggaggggcata
gccgtgaggacaggcctacactgcgcccacatactacacgaccatgtggatgccagcatg
ggtagcgtgtgggcaagcttctacatatacaactgcaaggaggatgccgagaggctcgca
gaagcactagaggagatactcaccacgaggaggtaa
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