Alteromonas pelagimontana: CA267_004980
Help
Entry
CA267_004980 CDS
T06582
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
apel
Alteromonas pelagimontana
Brite
KEGG Orthology (KO) [BR:
apel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apel03400
]
CA267_004980 (sbcD)
DNA repair and recombination proteins [BR:
apel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CA267_004980 (sbcD)
Archaeal homologous recombinant proteins
CA267_004980 (sbcD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Motif
Other DBs
NCBI-ProteinID:
QJR80175
UniProt:
A0A6M4MC98
LinkDB
All DBs
Position
complement(1084330..1085556)
Genome browser
AA seq
408 aa
AA seq
DB search
MKVLHTSDWHLGQSFFTKSRKDEHQAFLQWLLTQVAEEKIDAVIVAGDIFDTGTPPSYAR
EMYNQFVVDLQRLDCVLVVLGGNHDSVSTLNESRQLLACLNTFVVASTGVSIDEQVFVIP
DRAGKPGAVLCAVPFIRPRDVLESRAGETGVEKRQALEAAIKQHYHRLYSRAQTLKINDN
LDVPIIATGHLTAMGVSQTESVRDIYIGTLDGFGADGFPPADYIALGHIHKPQIVAKSEH
IRYSGAPIAMSFDELKSAKQVVIVGFDGAKRTAIRSINVPVFQAMAVIKGNLDHIEKALH
QTYGEHDGAPVWLCIEIEHQDYLSDLQQRIQTITDGLNVEVLQLRRVKNPRRKMLNQIQA
ETLSELTPEEVFTKRLAMETFDSEEEKAQIRQRFAQILSDVQSEGASQ
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtactgcacacctcagactggcatcttgggcaaagtttttttaccaagagccgc
aaagatgaacatcaggcttttttgcaatggttgctcacacaggtggctgaagaaaaaatt
gatgctgtcattgttgctggcgacatttttgataccggcacgccgccaagttatgcgcgg
gaaatgtacaaccaatttgtggtggacttacagcgtcttgattgtgtgttagtcgtgctg
ggcggaaaccacgattcggtttctacattaaacgaatcccgtcagttattagcctgcctg
aatacttttgttgttgccagtaccggtgtcagtattgatgagcaggtttttgtaataccg
gatcgtgcaggcaaaccgggcgcggtactgtgcgccgttccctttattcgcccgcgcgat
gtgctggaaagccgtgcaggtgaaaccggtgtcgaaaaacgccaggcgctggaggcggcg
attaagcagcactatcaccggctttacagcagggcgcaaacgttaaaaatcaatgataat
ctggatgttcccattattgccaccggccatctcaccgccatgggcgtgtcgcaaacagaa
agtgtgcgcgatatttatattggcacccttgacggcttcggtgcagatggctttccaccg
gcggattatatcgctcttgggcatattcataagccgcaaattgtcgctaagtctgagcat
atccgctacagcggcgcgcctattgccatgagttttgatgagctaaaatcagccaaacaa
gtggtaattgtggggttcgatggcgctaaaagaaccgctattcgcagtatcaatgttcct
gtatttcaggctatggctgttattaaaggtaatcttgatcatattgaaaaggcgctgcat
caaacgtatggcgagcatgatggcgcccccgtctggttatgtattgaaatagagcatcag
gattatttatctgacttacagcaacgtattcaaactatcaccgacgggctgaatgtggag
gtgctgcaactgcggcgggtaaaaaatcctcggcgtaagatgttgaatcagatacaggcc
gaaacgttatcagagcttactcctgaggaagtatttaccaaacgtctggcgatggaaacc
ttcgacagcgaagaagaaaaagcgcagatacgccagcgttttgcgcaaattctttcggat
gtgcaaagcgagggggcgagccaatga
DBGET
integrated database retrieval system
