Alteromonas pelagimontana: CA267_005500
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Entry
CA267_005500 CDS
T06582
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
apel
Alteromonas pelagimontana
Pathway
apel03410
Base excision repair
apel03430
Mismatch repair
apel03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
apel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CA267_005500 (recJ)
03430 Mismatch repair
CA267_005500 (recJ)
03440 Homologous recombination
CA267_005500 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
apel03400
]
CA267_005500 (recJ)
DNA repair and recombination proteins [BR:
apel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CA267_005500 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CA267_005500 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CA267_005500 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QJR80270
UniProt:
A0A6M4MC92
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All DBs
Position
complement(1193900..1195627)
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AA seq
575 aa
AA seq
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MGLPIVRRNIEYSPLSNELHPVLDRIYRGRQIASINELDHRVSGLHHYRELKGIDEAASL
LVAAIQTNKRIIIVGDFDADGATSTAVCILSLRQMGHSNIDYLVPNRFDFGYGLSEGIVD
VAHSQGAELLLTVDNGIACLAGVSRAKSLGMQVIVTDHHLPGNELPLADAIVNPNQKECT
FPSKNLAGVGVAFYLMLACRAQLQEKQWFSSHNLPVPNLATLLDIVAVGTVADVVVLDKN
NRVLVHQGLQRIRSGKCRPGIRALVEVARREISHLSAADLGFVVGPRLNAAGRLEDMALG
IECLLCEDDTQARHMAAELDGLNQQRRAIEESMKAEAEMVLQSVVLGEATMPSALVVYKE
DFHQGVIGIVAGRIKEKYRRPTIAFAHQDEQIIKGSARSVPGLHIRDVLDEVNRLYPGII
IKFGGHAMAAGLSLPAIKLKEFEVAFQTITDRYMAKAGELFTIVSDGELADNELDLSLAK
TLRQAGPFGQGFEPPLFDGIFELVSQKLLQEKHLKVVFRLPSGNEVDAIAFNVDNKIWPN
IAAKWVQVAYRLDVNVFRGKETVQLMIEELSVYEG
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgggattgcctattgtccgtcgcaacattgaatacagcccgttatcaaatgagttacat
ccggtattggatcgtatctatcgtggccgccaaattgcttccataaatgaattggatcac
cgggttagcgggttacaccattaccgcgaattgaaaggtattgacgaggctgcctctcta
cttgtcgcggcaattcagacgaataagcgcattattattgtcggagatttcgatgccgat
ggcgccactagtacggctgtttgtatattgtctttgcggcagatgggccactctaatata
gactatctggttcccaaccgttttgattttggctacggattaagcgaagggattgtagat
gttgctcattcccaaggcgcagagctgctgctgacagtggataatggtattgcctgtctg
gcaggggtatcacgagccaaatcgctgggaatgcaggttattgttactgatcatcatctt
cccggcaacgaacttcctctggccgatgctattgttaatcccaatcagaaagaatgtact
ttcccttcaaaaaatttagcaggagtgggagtcgctttttatctgatgctggcatgtcgt
gcgcagctgcaagaaaaacagtggttctcctctcataacttgccagttcccaatctcgcc
accctgttagatatcgtagcggttggtactgtcgcagatgtggtagtgctggataaaaac
aatcgtgtgctggtccatcaagggctccagcgtatccgtagcggcaagtgtcgccctggt
attcgggctctggtagaggtcgccaggcgggaaatcagccacttgagcgccgcagattta
ggttttgttgtggggccacggcttaacgctgccggcagattggaagatatggcgctgggt
attgagtgcttattgtgcgaggacgatacgcaggcgcgccatatggcagcggaactggat
gggcttaatcagcaacgtcgtgccattgaagaaagtatgaaagccgaggcggaaatggtt
cttcagtcagtggtgttgggggaggctacaatgccctcagcactggtagtctataaggaa
gactttcatcaaggggttatcgggattgtagcgggccgaataaaagaaaagtatcgccgc
ccgactattgcctttgcgcatcaggatgagcaaatcattaagggctctgctcgctcggtg
ccaggtctgcatattcgcgatgtgttggacgaagtgaatagactttatccaggcattatt
attaaatttggcggtcatgccatggcggctggattaagtttgccagcgataaaattaaaa
gaatttgaagttgcttttcaaacaataactgacagatacatggcaaaggccggtgagttg
tttaccattgtgagtgatggtgaattggcggataacgagctcgacctttcactggctaag
acactccgtcaggcaggcccttttggacaagggtttgaaccgccgttattcgatgggata
tttgaactggtttcgcaaaaattattgcaggaaaagcatttaaaagtcgtctttcgttta
ccctcgggcaatgaagtcgatgccattgcgttcaatgtagataacaaaatttggccgaac
attgcagcaaaatgggtgcaggtggcatatcggctggatgtgaatgtattcagaggcaaa
gaaaccgttcagctaatgattgaggagttgagtgtttatgaaggataa
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