Alteromonas pelagimontana: CA267_006805
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Entry
CA267_006805 CDS
T06582
Symbol
rhlB
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
apel
Alteromonas pelagimontana
Pathway
apel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
apel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CA267_006805 (rhlB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
apel03019
]
CA267_006805 (rhlB)
Enzymes [BR:
apel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CA267_006805 (rhlB)
Messenger RNA biogenesis [BR:
apel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
CA267_006805 (rhlB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QJR80504
UniProt:
A0A6M4MBB5
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All DBs
Position
1508399..1509694
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AA seq
431 aa
AA seq
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MQTTHLTETYFSDLPINPKVVEALTAANFTHCTPIQALSLPPLLEGLDIAGQAQTGTGKT
IAFLVATFHYLLGQTTVQPKTAKPGPRAIIMAPTRELAVQIFNDAKLLSEHTGLSLGLIY
GGEGYQSQREVLEEGVDIVIGTTGRILDYYKQGVFTLENIQVAVLDEADRMFDLGFIKDI
RFLFRRMPPATERLSMLFSATLSYRVQELAYEHMNNPTHVQIEPERKTATRVKEELFYPS
DEDKMLLLLTLLEEEWPEKAIIFANTKHACEKICDWLAADGHRVGLLSGDVPQKKRLGIL
EDFTKGGLDLLVATDVAARGLHIEEVTHVFNYDLPDDAEDYVHRIGRTGRAGRSGEAISF
ACEKYALNLPAIEQYIQHTIPVTDYDRSVLLDDIKPPRPRQRKRTPNARNTSRRGNKGRS
GNSNSRPHNKS
NT seq
1296 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaactcatttaaccgaaacatatttttctgatctgcccattaaccccaaagta
gttgaggcgttaacggcagccaatttcacccattgtacgccaattcaggcgctatctctg
cccccgctgttggaagggctggatatcgctggccaggcccagaccggtactggtaaaact
attgcctttctggtcgcgaccttccactacctgcttggtcaaactactgttcaaccaaaa
acagcaaagcccggacctcgtgccataattatggcaccaactcgcgaacttgccgtacaa
atattcaatgatgcaaaattgctcagcgaacataccggtttgtcacttggcctcatttat
gggggcgaaggttatcaaagtcaacgcgaagttctagaagaaggggtagatatagttatt
ggtacgaccggtcgcattctggattattataagcaaggcgtatttacgctggaaaatatc
caggttgcggtgttggacgaagccgatagaatgttcgatctgggctttattaaagacatt
cgctttttgttccgccgcatgcctcctgccacagaacgtctgagtatgctgttttcggct
acgctgagctatcgtgtgcaagagctggcctatgagcacatgaacaacccaacgcacgta
caaattgagccggaaagaaaaaccgccactcgggtaaaagaagagctattttatccgtct
gatgaagataagatgttgttacttctgacactgctggaagaagagtggccggaaaaagcc
atcatatttgccaataccaaacatgcttgtgaaaaaatttgtgactggctagcggctgat
ggtcatcgggtaggtttactgagtggcgatgtgccgcagaaaaagcgtttgggaatttta
gaagacttcaccaaaggtgggctggaccttttagtcgccaccgatgttgcggctcgcgga
ttgcacatagaagaagtcactcatgtgtttaactacgatttacctgatgatgcggaagat
tacgtacatcgtatcggtcgtactggcagggctggaagaagtggagaggccataagtttt
gcttgcgaaaagtatgcgctcaatcttcctgcaattgaacaatatattcagcatactatt
ccagtgactgactacgaccgctctgttctgttagacgatattaagccaccgcgtccgcgt
cagcgcaaacgtaccccaaatgcccgcaacacttcccggcgcggcaataaagggcgcagt
ggtaacagtaactcccgtcctcataacaaaagctag
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