Alteromonas pelagimontana: CA267_008220
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Entry
CA267_008220 CDS
T06582
Name
(GenBank) pectin methylesterase
KO
K01728
pectate lyase [EC:
4.2.2.2
]
Organism
apel
Alteromonas pelagimontana
Pathway
apel00040
Pentose and glucuronate interconversions
apel01100
Metabolic pathways
apel02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
apel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
CA267_008220
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CA267_008220
Enzymes [BR:
apel01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.2 pectate lyase
CA267_008220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pectate_lyase_4
Pectinesterase
3keto-disac_hyd
Big_2
Big_5
T2SS-T3SS_pil_N
Motif
Other DBs
NCBI-ProteinID:
QJR80763
UniProt:
A0A6M4MC94
LinkDB
All DBs
Position
1849529..1855666
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AA seq
2045 aa
AA seq
DB search
MKLTNVAAIIGGILLIAGCGEKSSTNVKLPPDPALTGVFVDSPVAGLGYQSDSVADGQTN
ENGEFFYFRGEQLTFHIGELTFPAAPASSVMSPLDMFTTDNAFHQSVVNTLRLLQSLDTD
GDPDNGISLSSSAASVATATLDEGQTLADFFNQSDADFAADVEVWLGAAGGASSTLVDKA
TAISHFVNYLENERGTLFPNTFDVTKFTGDIYAPYLSGKTVIQRTFSFTPDDENNVSGTY
SSVSDEKSHNGNYHFAFGRKVLVLASETETQYLISRSYNTVNDVYSLCTVTAQPSSSLVS
YVETCLAADDPMNAVFTFTEAQAAAESERLEEAANSIQAALEENFDTDTDTFFSSSYKRL
SDAPDAGALYYVTGGSPMVDASTGQMTLEGDRFTIGNAAENPAAVTSASDTVGQGIYNLS
EGFTISFDVVSHSSAGTLSLYVDNNTTGQDNSVHGGASKFASIALADGDLAGSRFSYTYA
PGDDVSGGDPTASDAKILDSSVTNSFFQLRTDSSGVITIDNLKIETIAGAVAPPEPPIAP
EPEEPEEPVIIPTTPLPVNYSFANLSEDIFSTNFSAIENAAGEAVPMLTITGGGVTQLAT
GIQLDGGRFTLGNTEPDVQSSGEDTSVNGALDLSRPYRVIFDVISAQGDEGDNNFQIYVD
NNTSGSANSYLGGNSRFYNEPVSSLVAGTTVSIEGQVASQNSYLQFRSESGSVVVIDNIR
IEYIDALVLLEETFETDSDAFFTAGYKATDGSGSTSFYSVTGGGSGLTISNGALTLDSAR
FTLGNTAPDVETSGEENVTTGILDLSREYVISMDIVAVEDTEGNNNFIVYVDNNTSSGSK
SIHGDDSKFYSVAITSLTAGQRLTIPGFTATSSSFLQFRTESGGKVTIDNLVISYLDDAP
DTTLFECKSEPDLYFCEDFAESSLDNLELIADSAASAGSQGTFDILNDNGNNVLRYTAGG
EGGEIFLLKESALAGVPDTGDYFVEARIRPRQNSTTRNKQLFLLGRYESAGNWYGGGLNV
QNANTSTQVEVAISKEGSISRPVQLKSPIELGAQDDTDGVWYRVRFDMVGDELTVYLNGE
NMGTTTDSRFTAKGLIGLFTNNRSFELDDIKVGDPTVKPVQLSLDYTSATWETTTSEDPL
YMYVTAVKNDGITEDSFSVASSDSRVVSVAQNGPQVVLTASAAGTATITFTSGSDPTLYK
TLTVSVGEGFTMPAGSYGDLFPLTSPFAGKQNAYVDTTLRLTFDTAPTLGEVGEIRIYKL
SDDTLVDVISVGTDLDAIGYDGQDRLRHVTYRPVQIDGNALVVKPHNHVLEYNESYYVAI
GESVVSDTTLNGTAFSGLGKDANWTFHTREAMPEGTSLLVDDDGEADFRTVQGALNYVMQ
HVAADTASTITIRDGSYEELLFLRGQNNITIQGESRDNTIVYYDNFESFNGGSGKSSASG
TTASEGGRSVFLIEGADNLTLHNFTLKNSHIRSNAYSNQAETLYFNNDEGRLSAINMNFV
SEQDTLLLKGYSWFYESLIAGNVDFIWGYVNTALFEDSEIRTIGDSKDGDPNEDTAGGYI
LQARVPDVSYKGFVFLNNSFTNGPGPIGNGVLNDSTYIARSGGSDSYFDNITLINNRFDT
HIAAIGWAGEGVRDQPASNPATPSASAGWREYGSMDMQGNLLDLSSRESVYLLSDAEVTS
LTSREAIFAHYNNNQGWLPTMPAAPDIQASIPTSSSGFAQYNYTLTGGEGGSVVTVDNGA
SLQSALDTAKAANTPVTIYVDGTITDANTGGTGAPIEIRDMNDVSIIGVANRGELDGIGI
LIKRANNVIVRNLKIHHVLTEGKDAIAIEGDTDGSTTSHIWIDHNELYSTLSVDKDYYDG
LLDSKRGAKNITISYNYLHDHWKGSLHGHTEEDTDSANTDRMITFHHNRFENIESRLPLF
RYGVGHLYNNYYNHITSTAINARQGAELRIDNNVFENTQNPIVSFYSDVIGYWNTSGNLF
GEGVTWTTPEGSDVVAGPDATPTSSYEVPYDYTRDDTARVKAIVINNAGVGKIIQDPDTI
PDKAN
NT seq
6138 nt
NT seq
+upstream
nt +downstream
nt
atgaaactcacaaatgtcgcagccattattggcggtatcctgctgatagcagggtgcgga
gagaaaagttccacaaacgtaaaattgccccctgatcccgctctaaccggagtgtttgta
gacagcccggtggcaggacttggatatcagtccgattcggtagccgacggccagaccaat
gaaaacggggaatttttctactttcgcggtgaacagctcacatttcacatcggtgaactg
acgtttcctgccgcccctgcttccagtgtcatgtcgccgctggatatgtttaccaccgac
aacgcctttcaccaatcggtcgtaaacacccttcgtctgttacaatcgctggacacggac
ggcgatccagataatggcatcagcttaagcagcagtgctgccagcgtcgcaaccgccacg
ttagacgaagggcaaacattggctgacttttttaaccaatcagacgctgacttcgccgca
gacgttgaggtgtggctgggcgcagcaggtggagcaagcagtacgctagtggataaagcc
actgccatcagtcactttgtgaactaccttgaaaacgaacgtggcaccctgtttcccaat
acatttgatgtcaccaagttcaccggcgacatctacgcgccatatctttcgggcaaaacg
gtaattcagcgcactttctccttcactcccgatgatgaaaataacgtatcgggaacctac
tccagcgtctcagatgaaaaaagccacaacggcaactatcattttgcctttggccgcaaa
gtgctcgtactggcgagcgaaaccgaaactcaatatttgatttcgcggtcgtacaatacg
gtgaatgacgtgtacagcctgtgcactgttaccgcgcagccgtcttcgtcgctagtctct
tatgttgaaacctgcctggctgcagacgacccgatgaatgctgttttcacctttactgag
gcccaggcggcagcagaatccgaacgattagaagaagcagcgaattccatacaagcggca
ctggaagaaaatttcgataccgataccgatacctttttctcatcttcgtacaaaaggcta
agcgacgcacctgacgccggcgcgctttattatgtcaccggtggaagcccaatggttgac
gcctccacaggccaaatgacgttagaaggcgatcggtttactatcggcaatgcagccgaa
aatccggctgccgtcacgtcggcatcagataccgttgggcagggtatttataacctgagc
gaaggctttaccatcagctttgatgtcgtttctcacagtagtgccggtacgctcagtttg
tacgtcgacaataataccaccggtcaggataactcagttcacggcggtgcgtcgaagttc
gccagcattgccctggcagacggtgatttagcaggcagccgcttttcctacacctacgcg
cccggagatgacgtttcgggaggcgatcccaccgcctctgatgcaaaaatactggacagt
tcagttaccaatagtttcttccagcttcgtacggactccagcggtgttatcaccattgat
aacctgaagattgaaactattgcgggcgcggtggcaccacctgaaccgccaatcgcaccg
gagcctgaggaaccggaagaaccagtgatcattcccaccacgcctttaccggtaaactac
agctttgctaatctcagcgaagacatcttttctaccaatttctccgccatcgaaaacgca
gccggcgaagcggtgcccatgctcacaattactggtggcggggtcacacaactggccaca
ggtattcagttagacggaggccgctttacattgggtaacactgaaccggatgtgcaaagc
tcaggcgaagatacctccgtcaacggcgcattggacttaagtcgtccttaccgggtaatt
ttcgatgtcatatcggcgcagggcgatgaaggcgacaataacttccagatttacgtagat
aacaacacctctggaagcgccaactcttacttaggcggtaattcgcgcttttacaatgag
cccgtaagtagcttggttgccggcaccacagttagcatcgaaggtcaggtggccagccag
aattcatacctgcaattccgatccgaaagcggttcagtggtggttatcgacaatattcgt
attgaatatattgatgcccttgtgctacttgaggaaacgttcgaaaccgattccgacgca
ttctttaccgcaggttataaagctactgacggcagcggcagtacatccttttacagcgtc
acaggcggtggttcgggattaaccatttccaatggcgcgcttactctcgacagtgctcgt
tttactttgggcaatacggcgcctgatgtagaaacctcaggcgaggaaaatgtcaccacc
ggcatactggacctgagtcgtgaatacgtaatcagcatggatattgttgcagttgaagat
acagaaggtaacaataattttattgtctatgtagataacaacaccagtagcggtagcaaa
tccattcatggtgacgattctaaattctacagtgtagcgataacctctctcactgccggg
caacgcctgacgattcctggattcacggcgacttcgtcctctttcttacagtttcgtaca
gaaagcggtggcaaggtaactatcgataatctagtaatttcgtatctggacgacgccccc
gacaccacgctttttgaatgcaaaagcgagccggacctgtatttttgtgaggactttgcc
gaaagttcgctggataatctggagctgatagccgacagcgcagccagtgccggctcccaa
ggcaccttcgacattctcaacgacaacggcaacaatgttctgcgttatacggctggcggt
gaaggcggcgaaatctttcttctgaaagaaagtgcattggccggcgtacctgacacggga
gactattttgtagaagcccgcattcgtccccgtcaaaacagcaccacgcgaaacaaacag
ctctttttgcttggacgatatgaaagtgcgggtaactggtacggcggtggactgaacgta
caaaatgccaataccagtactcaggtagaagttgccattagcaaagaaggtagtatcagc
cgcccggtgcagctgaaatcgccgattgaactgggagcacaggacgatactgacggggtg
tggtatcgcgttcgatttgacatggtgggggatgaactcacggtttaccttaacggtgaa
aacatgggaactaccaccgactcacgtttcaccgcaaaaggcctgattggcctgtttacc
aataatcggtcttttgaattagatgacataaaagtgggcgatcccaccgtcaaaccagtg
cagctatcgctggactataccagcgctacgtgggaaaccacgaccagcgaagacccgctg
tacatgtatgtcactgcggtcaaaaatgacggcatcaccgaggatagcttttccgttgcc
agtagcgatagccgcgtggtgagtgttgcgcagaatgggccgcaagtggtgctcaccgcc
agtgctgcaggtactgccactataacctttacttccggctcagaccctacgctgtataag
acactcaccgtctccgtaggagaaggctttaccatgccagctggcagctacggcgatctg
ttcccgctcaccagcccgtttgcgggcaaacagaacgcctatgtcgacaccaccttgcgc
ctaacctttgatactgcgccaactctaggcgaggtaggagaaattcgtatctataagctt
agcgatgatacgctggtggatgtcatttctgtgggtaccgatttggatgccattggttat
gacgggcaagaccggctacgtcacgtaacttatcgtccggtacaaattgatggaaacgca
ttagtggttaagccgcacaatcatgtactggagtataacgaaagttactatgtggctatc
ggtgaaagtgtagtttcagatacaaccttaaatggcactgcctttagcgggctaggcaaa
gatgcaaactggacattccacacccgcgaagccatgccagaggggacatctttactggtt
gatgatgacggtgaagctgatttcagaaccgtgcagggagcattaaactacgtgatgcaa
cacgtagctgctgatactgcctctaccattactattcgcgatggcagttatgaggagtta
ctgtttttgcgcggccagaacaacattaccattcaaggggaaagccgtgacaacaccatt
gtttactacgacaactttgaaagctttaatggcggcagcggtaaatcgtctgcatctggc
accaccgcgtctgaaggagggcgcagtgtatttttaattgaaggcgctgataatctcact
ctacataatttcacgctgaaaaattcacatatccgcagtaatgcgtattccaatcaagcc
gaaacgctgtattttaacaacgacgagggccgcttaagtgctataaatatgaactttgtc
agcgagcaggacaccttgctgttaaaaggctacagctggttttatgaatcattgattgca
ggtaacgttgattttatctggggatacgttaacaccgctttatttgaagacagcgaaatc
cgtacgattggtgattctaaagatggcgatccgaatgaagataccgcaggcggctatata
ttgcaggcgcgagtgccagatgttagctacaaaggctttgtctttttaaacaatagcttc
accaacggccccggccctatcggcaatggtgttctgaatgactcaacttatatcgccaga
agcggcggcagtgacagctactttgataatattacgcttatcaataaccgcttcgacacc
cacattgccgctattggctgggccggtgaaggcgtgcgcgatcagcccgcctccaatcca
gccacacccagcgccagtgccgggtggagagaatacggcagtatggatatgcaaggcaat
ttgcttgatttaagcagccgtgaatctgtctatttgttatctgacgctgaagtgacatcg
cttacctcccgcgaggctatttttgctcactacaacaataaccaagggtggctaccgacg
atgccggcggcccctgacattcaggcttcaataccaacttcatccagcggcttcgcgcaa
tacaattacacgcttaccggcggcgaaggtggcagcgtagtgactgtagacaatggggca
tcgttacaatccgcactggatactgctaaagcagccaatacacctgttaccatatatgtt
gacggcaccattactgatgccaacactggaggtacaggagcgcctattgagattcgcgat
atgaatgacgtgtctatcattggagtcgccaaccgtggagaacttgatggtattggtatc
ttgattaagcgcgccaataacgtgattgtgcgaaaccttaagattcaccatgtgctgaca
gaaggcaaagatgcaattgccattgagggggatactgatggttcaaccacaagtcacatc
tggattgaccataatgagctgtacagcacgctttcggtagataaggattattacgatggt
ctgcttgacagcaaacgcggcgccaagaacatcaccatttcctataactatttgcacgat
cactggaaaggatcgctgcacggccatactgaagaggacaccgacagtgcgaacaccgac
cgcatgataactttccatcataatcggtttgaaaatattgagtcgcgccttccgctgttc
cgctatggtgtaggccatctgtacaacaactactataatcatataacctctacggcgatt
aatgcacgccagggtgctgagctgcgaatagataacaatgtgtttgaaaacacccaaaat
cccattgtatcgttctactcagatgtcatcggctactggaatacttcgggcaacctgttt
ggtgaaggcgttacctggacaaccccggaaggctcagatgtggtggcaggaccggatgct
acgcccacatccagctatgaggtgccgtacgattatacacgggacgacacagccagagtg
aaagccatcgtgataaacaatgcgggcgtgggtaaaatcatacaggatccagacactatc
ccggataaagcgaattaa
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